RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ECSCRQ19T08 205 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 VSTM2AQ8TAG5 236 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CCDC32Q9BV29 185 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 FAM212BQ9NTI7 297 aaPredicted RBP13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 COMMD9Q9P000 198 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ZNF580Q9UK33 172 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 STAB1Q9NY15 2570 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TEX13DA0A0J9YY54 714 aaPredicted RBP13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 NAP1L6A6NFF2 107 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 H0Y980 276 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 PLA2G10O15496 165 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 IGKV1-39P01597 117 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 IGKV1D-39P04432 117 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SERPINE2P07093 398 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 IL6RP08887 468 aaPredicted RBP13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CD40LGP29965 261 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 LFNGQ8NES3 379 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OR4X2Q8NGF9 303 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SGMS2Q8NHU3 365 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TMEM230Q96A57 120 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 WDR12Q9GZL7 423 aaKnown RBP13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 NAA60Q9H7X0 242 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TMEM140Q9NV12 185 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 BET1LQ9NYM9 111 aa13.48□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 MSGN1A6NI15 193 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CRYM-AS1A6NIL9 109 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 MARCH11A6NNE9 402 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CENPXA8MT69 81 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 UPK2O00526 184 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 MYOD1P15172 320 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 AKR1C4P17516 323 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 PPIFP30405 207 aaKnown RBP13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CRIP2P52943 208 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ERVK-16P61578 105 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CD83Q01151 205 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 C19orf54Q5BKX5 351 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 UNQ5815/PRO19632Q6UWF5 114 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OR4A5Q8NH83 315 aa13.47□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CREBL2O60519 120 aaPredicted RBP13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ACTL6BO94805 426 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OPN1MWP04001 364 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 APELAP0DMC3 54 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OPN1MW2P0DN77 364 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OPN1MW3P0DN78 364 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 BTCP35070 178 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TMEM267Q0VDI3 215 aaPredicted RBP13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 NSUN5P1Q3KNT7 163 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 MINDY2Q8NBR6 621 aa13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 C7orf50Q9BRJ6 194 aaKnown RBP13.46□□□□□ -0.25
PTCHD3P3-201ENST00000403073 A0A1W2PN81 502 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 A0A1W2PRX2 142 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 E7EUB6 86 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 SOX15O60248 233 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 IGHG4P01861 327 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 HLA-GP17693 338 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 UCP1P25874 307 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 CHRNA7P36544 502 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 RPL8P62917 257 aaKnown RBP13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 TRIM16LQ309B1 348 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 AKIRIN2Q53H80 203 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 ASPHD1Q5U4P2 390 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 SGPP2Q8IWX5 399 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 COMMD1Q8N668 190 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 OR5T1Q8NG75 326 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 CASTOR1Q8WTX7 329 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 SEC22AQ96IW7 307 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 PHB2Q99623 299 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 NSG2Q9Y328 171 aa13.45□□□□□ -0.26
PTCHD3P3-201ENST00000403073 ADARB2-AS1A8MUL3 147 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 LYRM1O43325 122 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 B3GALNT1O75752 331 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 NDUFB6O95139 128 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 IGLV1-40P01703 118 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 RPLP1P05386 114 aaKnown RBP13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 OR9G9P0C7N8 305 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 MAS1LP35410 378 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 FOXE3Q13461 319 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 RBMS2Q15434 407 aaKnown RBP13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 KHDC1LQ5JSQ8 128 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 GLYATL2Q8WU03 294 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 TMEM222Q9H0R3 208 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 PRR13Q9NZ81 148 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 FLVCR2Q9UPI3 526 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 FOXA2Q9Y261 457 aaPredicted RBP13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 ANK2Q01484 3957 aa13.44□□□□□ -0.26
PTCHD3P3-201ENST00000403073 A0A1B0GW64 132 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms