RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PRR20EP86478 221 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PRR20CP86479 221 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PRR20DP86480 221 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PRR20BP86481 221 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PRR20AP86496 221 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM187Q14656 261 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PLGLAQ15195 96 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 C19orf54Q5BKX5 351 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 C10orf55Q5SWW7 151 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 HIST2H2BDQ6DRA6 164 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SLC25A42Q86VD7 318 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 KLHDC1Q8N7A1 406 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 POC5Q8NA72 575 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 WFDC12Q8WWY7 111 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 R3HDM4Q96D70 268 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SCGB3A2Q96PL1 93 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TSC22D3Q99576 134 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM222Q9H0R3 208 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR51J1Q9H342 316 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM140Q9NV12 185 aa9.77□□□□□ -0.85
HLA-DQB1-203ENST00000399082 DNHD1Q96M86 4753 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TEX13DA0A0J9YY54 714 aaPredicted RBP9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CGB1A6NKQ9 187 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR2A4O95047 310 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CDS2O95674 445 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 HRASP01112 189 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 KRASP01116 189 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TCRBP04435 133 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 IGF1P05019 195 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR9G9P0C7N8 305 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CFHR3Q02985 330 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SRSF4Q08170 494 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PPP1R1AQ13522 171 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 IZUMO4Q1ZYL8 232 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ZNF562Q6V9R5 426 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CENPSQ8N2Z9 138 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR2A7Q96R45 310 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 FAM103A1Q9BTL3 118 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 C20orf85Q9H1P6 137 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 BET1LQ9NYM9 111 aa9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TET2Q6N021 2002 aaPredicted RBP9.76□□□□□ -0.85
HLA-DQB1-203ENST00000399082 A0A1B0GUS0 222 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 E7EUB6 86 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 G3V318 75 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 UPK2O00526 184 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 B3GALNT1O75752 331 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SERPINE2P07093 398 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ANXA7P20073 488 aaKnown RBP9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ASPHD1Q5U4P2 390 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SGPP2Q8IWX5 399 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CADM3Q8N126 398 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 STPG2Q8N412 459 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 VSTM2AQ8TAG5 236 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM56Q96MV1 263 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PARP11Q9NR21 331 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ZNF580Q9UK33 172 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM56-RWDD3S4R434 201 aa9.75□□□□□ -0.85
HLA-DQB1-203ENST00000399082 DBX1A6NMT0 343 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 AP4M1O00189 453 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 KCNAB3O43448 404 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SFT2D2O95562 160 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SPNP16150 400 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 PPIFP30405 207 aaKnown RBP9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 MECP2P51608 486 aaKnown RBP9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 GNB1P62873 340 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 FXYD3Q14802 87 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TRIM16LQ309B1 348 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM128Q5BJH2 165 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TCTEX1D4Q5JR98 221 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 LCE2AQ5TA79 106 aaPredicted RBP9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 NRARPQ7Z6K4 114 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 MMD2Q8IY49 270 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SELENOHQ8IZQ5 122 aaKnown RBP9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 DMBX1Q8NFW5 382 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR4A5Q8NH83 315 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ARPC1AQ92747 370 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 NUDT15Q9NV35 164 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 NSG2Q9Y328 171 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 NUBP2Q9Y5Y2 271 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 WSB1Q9Y6I7 421 aa9.74□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TRAV6A0A075B6T7 132 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 FAM240BA0A1B0GVZ2 78 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TEX22C9J3V5 150 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SOX15O60248 233 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR4E1P0C645 316 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 HLA-GP17693 338 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 UBE2MP61081 183 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ERVK-16P61578 105 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 RPL8P62917 257 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TNXAQ16473 311 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TMEM268Q5VZI3 342 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 MZT2BQ6NZ67 158 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 Q6ZRM9 215 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ZNF329Q86UD4 541 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 FOXRED2Q8IWF2 684 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SLC35G3Q8N808 338 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms