RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NSD1Q96L73 2696 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 A0A0G2JNJ9 132 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 PPP1R2P9O14990 202 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 BMI1P35226 326 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 CAMLGP49069 296 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 DYNLT3P51808 116 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ERVFRD-1P60508 538 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 Q6ZRG5 221 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 CLRN3Q8NCR9 226 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 HDHD3Q9BSH5 251 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 MRPL32Q9BYC8 188 aaKnown RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 Q9UFV3 132 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 CDH23Q9H251 3354 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 KALRNO60229 2985 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ADAM20O43506 726 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 PLP1P60201 277 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF816Q0VGE8 651 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF714Q96N38 554 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 CHST1O43916 411 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM50AO95807 157 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 GATA3P23771 443 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 VDAC2P45880 294 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ACOT6Q3I5F7 207 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF833PQ6ZTB9 187 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 RNF144BQ7Z419 303 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 DYNLRB1Q9NP97 96 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 AGRNO00468 2067 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 TRBV24-1A0A075B6N3 115 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 SSX7Q7RTT5 188 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ITLN1Q8WWA0 313 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 GPR146Q96CH1 333 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 CCDC120Q96HB5 630 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 RALYQ9UKM9 306 aaKnown RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 K7EQM0 130 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 OPN1MWP04001 364 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 OPN1MW2P0DN77 364 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 OPN1MW3P0DN78 364 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 PAX1P15863 534 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 PI3P19957 117 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 FCGR2BP31994 310 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 SNCAP37840 140 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 MEOX2P50222 304 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 TAS2R45P59539 299 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 ATP1A1-AS1Q5TC04 95 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 OTPQ5XKR4 325 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 VAX2Q9UIW0 290 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 TCF19Q9Y242 345 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 C17orf98A8MV24 154 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 RNASEK-C17orf49H0YIS7 233 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF83P51522 516 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 EBI3Q14213 229 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 R3HDM4Q96D70 268 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 CHRDL1Q9BU40 450 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 ACTR3CQ9C0K3 210 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-206ENST00000397617 SLC39A9Q9NUM3 307 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 CELA3BP08861 270 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 RND2P52198 227 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 PAX9P55771 341 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 SLC38A11Q08AI6 406 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 DCTN5Q9BTE1 182 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 OR2D2Q9H210 308 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 ELOA3CA0A087WX78 387 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-206ENST00000397617 CRYGCP07315 174 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 SELLP14151 372 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 PRTN3P24158 256 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 NPY1RP25929 384 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 LPAR6P43657 344 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 GPR6P46095 362 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-206ENST00000397617 GUK1Q16774 197 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM167BQ9NRX6 74 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 SPANXCQ9NY87 97 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 CISD1Q9NZ45 108 aaKnown RBP4.84□□□□□ -1.63
PTPRD-206ENST00000397617 FAM157AC9JC47 383 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 SIRPB1O00241 398 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 PDE6DO43924 150 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 IGLV2-14P01704 120 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 DSCR9P59020 149 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 ATXN7L3Q14CW9 347 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-206ENST00000397617 PLGLAQ15195 96 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 C3AR1Q16581 482 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 OR11H6Q8NGC7 330 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 OR13A1Q8NGR1 328 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 SCRT1Q9BWW7 348 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 CBLN4Q9NTU7 201 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 STAG3L2P0CL84 134 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 RELBQ01201 579 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 IL1F10Q8WWZ1 152 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 COMMD5Q9GZQ3 224 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 MSL2Q9HCI7 577 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 TREM1Q9NP99 234 aa4.84□□□□□ -1.63
PTPRD-206ENST00000397617 TBL2Q9Y4P3 447 aaKnown RBP4.84□□□□□ -1.63
PTPRD-206ENST00000397617 HECTD1Q9ULT8 2610 aa4.84□□□□□ -1.64
PTPRD-206ENST00000397617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-206ENST00000397617 ANOS1P23352 680 aa4.84□□□□□ -1.64
PTPRD-206ENST00000397617 ARL16Q0P5N6 197 aa4.84□□□□□ -1.64
PTPRD-206ENST00000397617 MST1LQ2TV78 715 aa4.84□□□□□ -1.64
PTPRD-206ENST00000397617 SAMD13Q5VXD3 122 aa4.84□□□□□ -1.64
PTPRD-206ENST00000397617 OPN3Q9H1Y3 402 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-206ENST00000397617 RAI1Q7Z5J4 1906 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-206ENST00000397617 APOC3P02656 99 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms