RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CLCC1Q96S66 551 aa18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 NPFFR1Q9GZQ6 430 aa18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 GPN1Q9HCN4 374 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 IGKV1-5P01602 117 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 CRYBA1P05813 215 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 H2BFWTQ7Z2G1 175 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 SLC35G3Q8N808 338 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 RRNAD1Q96FB5 475 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 BET1LQ9NYM9 111 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 KBTBD11O94819 623 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 BLCAPP62952 87 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 C9orf152Q5JTZ5 239 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 LYZL2Q7Z4W2 148 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 PPP1R27Q86WC6 154 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 LRTM2Q8N967 370 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 MITD1Q8WV92 249 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 PHB2Q99623 299 aa18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 RANBP3Q9H6Z4 567 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-203ENST00000397397 PIGBOS1A0A0B4J2F0 54 aa18.73■□□□□ 0.59
TSPAN4-203ENST00000397397 RPL15P61313 204 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-203ENST00000397397 OR4A5Q8NH83 315 aa18.73■□□□□ 0.59
TSPAN4-203ENST00000397397 TMEM167AQ8TBQ9 72 aa18.73■□□□□ 0.59
TSPAN4-203ENST00000397397 MDFIQ99750 246 aa18.73■□□□□ 0.59
TSPAN4-203ENST00000397397 A0A0B4J2A0 478 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 UPK2O00526 184 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 FCN1O00602 326 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 OR9G9P0C7N8 305 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 PJVKQ0ZLH3 352 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 PRSS8Q16651 343 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 TATDN3Q17R31 274 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 C12orf45Q8N5I9 185 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 UXS1Q8NBZ7 420 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 PRSS22Q9GZN4 317 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 ZNF430Q9H8G1 570 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 SHPKQ9UHJ6 478 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 MMP24Q9Y5R2 645 aa18.72■□□□□ 0.59
TSPAN4-203ENST00000397397 TRAV3A0A0B4J244 114 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 DUXBA0A1W2PPF3 345 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 SNRPGP15A8MWD9 76 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 CREBL2O60519 120 aaPredicted RBP18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 CA2P00918 260 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 HLA-DRB1P01911 266 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 IL6RP08887 468 aaPredicted RBP18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 IZUMO4Q1ZYL8 232 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 MMD2Q8IY49 270 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 CADM3Q8N126 398 aa18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 LSM10Q969L4 123 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-203ENST00000397397 A0A0B4J293 547 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 A0A0G2JRQ6 117 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 SNAPC5O75971 98 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 HOXB5P09067 269 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 P0C879 139 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 VDAC1P21796 283 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 GNB1P62873 340 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 MRGPRG-AS1Q2M3A8 158 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 Q6ZS46 218 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 FAM219AQ8IW50 185 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 TAF15Q92804 592 aaKnown RBP eCLIP18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 GPR146Q96CH1 333 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 HSPB9Q9BQS6 159 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 NSG2Q9Y328 171 aa18.7■□□□□ 0.58
TSPAN4-203ENST00000397397 TNXAQ16473 311 aa18.69■□□□□ 0.58
TSPAN4-203ENST00000397397 OR4A16Q8NH70 328 aa18.69■□□□□ 0.58
TSPAN4-203ENST00000397397 ZNF702PQ9H963 129 aa18.69■□□□□ 0.58
TSPAN4-203ENST00000397397 ALG5Q9Y673 324 aa18.69■□□□□ 0.58
TSPAN4-203ENST00000397397 IGHV7-81A0A0B4J1V7 117 aa18.68■□□□□ 0.58
TSPAN4-203ENST00000397397 ACTL6BO94805 426 aa18.68■□□□□ 0.58
TSPAN4-203ENST00000397397 RPL8P62917 257 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-203ENST00000397397 ARSJQ5FYB0 599 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-203ENST00000397397 Q6ZSV7 163 aa18.68■□□□□ 0.58
TSPAN4-203ENST00000397397 TMED3Q9Y3Q3 217 aa18.68■□□□□ 0.58
TSPAN4-203ENST00000397397 FBN1P35555 2871 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 C7orf66A4D0T2 115 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 ADAP1O75689 374 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 CNIH1O95406 144 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 HLA-GP17693 338 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 OR2B8PP59922 312 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 CX3CL1P78423 397 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 RELBQ01201 579 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 NMSQ5H8A3 153 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 GGNBP1Q5YKI7 109 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 ZNF562Q6V9R5 426 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 OR51J1Q9H342 316 aa18.67■□□□□ 0.58
TSPAN4-203ENST00000397397 RBMXL2O75526 392 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 IFNA21P01568 189 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 IGHG2P01859 326 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 MAS1LP35410 378 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 FXYD3Q14802 87 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 Q6ZRM9 215 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 SLC35E3Q7Z769 313 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 ABHD5Q8WTS1 349 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 CACNG5Q9UF02 275 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 PRNDQ9UKY0 176 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 DNHD1Q96M86 4753 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 PLXNB1O43157 2135 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 LINC01548A6NM66 108 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 DBX1A6NMT0 343 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 KCNAB3O43448 404 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 SSNA1O43805 119 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 TSPAN9O75954 239 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms