RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM71E2Q8N5Q1 922 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 OR10J5Q8NHC4 309 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 NOL4LQ96MY1 436 aaPredicted RBP11.5□□□□□ -0.57
SEC13-208ENST00000397109 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 AGMATQ9BSE5 352 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 NMES1Q9C002 83 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 COMMD9Q9P000 198 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 MEGF8Q7Z7M0 2845 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 A0A1W2PRX2 142 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 BET1O15155 118 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 TUSC2O75896 110 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 PF4V1P10720 104 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 SLC25A4P12235 298 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 FCGR2CP31995 323 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 MC5RP33032 325 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 LGALSLQ3ZCW2 172 aaPredicted RBP11.49□□□□□ -0.57
SEC13-208ENST00000397109 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 GSG1LQ6UXU4 331 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 PARP12Q9H0J9 701 aaKnown RBP11.49□□□□□ -0.57
SEC13-208ENST00000397109 ZFP57Q9NU63 452 aa11.49□□□□□ -0.57
SEC13-208ENST00000397109 CRYM-AS1A6NIL9 109 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 B3GALNT1O75752 331 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 HERV-K104P61576 105 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 SUPT4H1P63272 117 aaKnown RBP11.48□□□□□ -0.57
SEC13-208ENST00000397109 RPL39P5Q59GN2 51 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 KHDC1LQ5JSQ8 128 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 KCTD9Q7L273 389 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 RDH8Q9NYR8 311 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
SEC13-208ENST00000397109 NBR2O15453 112 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 PPYP01298 95 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 RND3P61587 244 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 TEX38Q6PEX7 206 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
SEC13-208ENST00000397109 NPBQ8NG41 125 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 RNF5Q99942 180 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 PDCD10Q9BUL8 212 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 LINC00527Q9UJ94 153 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 ZNF580Q9UK33 172 aa11.47□□□□□ -0.57
SEC13-208ENST00000397109 LINC01548A6NM66 108 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 H0YJW9 148 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 PF4P02776 101 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 RPA2P15927 270 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 S100GP29377 79 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 PIGPP57054 158 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 SRPXP78539 464 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 C5orf64Q2M2E5 130 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 Q5BKY6 102 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 OR5AN1Q8NGI8 311 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 RNF150Q9ULK6 438 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 GAB2Q9UQC2 676 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 WASHC3Q9Y3C0 194 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 BOLA1Q9Y3E2 137 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 OR2W1Q9Y3N9 320 aa11.46□□□□□ -0.57
SEC13-208ENST00000397109 TEX13DA0A0J9YY54 714 aaPredicted RBP11.45□□□□□ -0.58
SEC13-208ENST00000397109 H7C2Y5 167 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 L7N2F9 121 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 WIPF1O43516 503 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 NDUFA3O95167 84 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 SIX6O95475 246 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 HLA-DRB1P01911 266 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 IGF1P05019 195 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 VDAC1P21796 283 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 RPL23AP62750 156 aaKnown RBP11.45□□□□□ -0.58
SEC13-208ENST00000397109 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 WFDC9Q8NEX5 89 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 FXYD6Q9H0Q3 95 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
SEC13-208ENST00000397109 A0A0D9SG52 128 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 IFNA21P01568 189 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 APOA2P02652 100 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 ELANEP08246 267 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 PET100P0DJ07 73 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 CD33P20138 364 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 AADACP22760 399 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 FOXE3Q13461 319 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 ZNF345Q14585 488 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 CXorf66Q5JRM2 361 aaPredicted RBP11.44□□□□□ -0.58
SEC13-208ENST00000397109 SAMD5Q5TGI4 173 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 C1QL4Q86Z23 238 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 RBMXL1Q96E39 390 aaKnown RBP11.44□□□□□ -0.58
SEC13-208ENST00000397109 RITA1Q96K30 269 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 C2orf50Q96LR7 162 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 SLC2A9Q9NRM0 540 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 RBM7Q9Y580 266 aaKnown RBP11.44□□□□□ -0.58
SEC13-208ENST00000397109 C5orf51A6NDU8 294 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 G3V4G9 280 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 GPR31O00270 319 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 RRHO14718 337 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms