RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 OR10A7Q8NGE5 316 aa12.14□□□□□ -0.47
TM9SF1-202ENST00000396854 TOLLIPQ9H0E2 274 aa12.14□□□□□ -0.47
TM9SF1-202ENST00000396854 UNKLQ9H9P5 680 aaKnown RBP12.14□□□□□ -0.47
TM9SF1-202ENST00000396854 OR1A1Q9P1Q5 309 aa12.14□□□□□ -0.47
TM9SF1-202ENST00000396854 C17orf98A8MV24 154 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 TNFSF12O43508 249 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 EPHA1P21709 976 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 LCN2P80188 198 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 UBALD1Q8TB05 177 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 IL1F10Q8WWZ1 152 aa12.13□□□□□ -0.47
TM9SF1-202ENST00000396854 IGHV2-70DA0A0C4DH43 119 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A0G2JRQ6 117 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 RBP4P02753 201 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 S100A8P05109 93 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 C11orf42Q8N5U0 333 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 RFESDQ8TAC1 157 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 YPEL4Q96NS1 127 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 IDI2-AS1Q9NZ38 188 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 JPT1Q9UK76 154 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A1W2PPE2 198 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 DFFBO76075 338 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 S100A6P06703 90 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 LOXL3P58215 753 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 TAS2R30P59541 319 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 STX12Q86Y82 276 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 FAM24BQ8N5W8 94 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 KIR3DL3Q8N743 410 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 OR10V1Q8NGI7 309 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 GPR146Q96CH1 333 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-202ENST00000396854 AKAP9Q99996 3911 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 hCG_1809904A0A1W2PP81 198 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A1W2PR64 198 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A1W2PRV1 198 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 M0R1W7 72 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 TXNL1O43396 289 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 ARG1P05089 322 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 SMIM6P0DI80 62 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 AKR1C8PQ5T2L2 129 aa12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 RBMXL1Q96E39 390 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
TM9SF1-202ENST00000396854 B4DSR2 109 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 MMP23AO75900 390 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 NXPH3O95157 252 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 HBE1P02100 147 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 SERPINE2P07093 398 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 RUNX1Q01196 453 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 ICAM4Q14773 271 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 PRAMEF5Q5TYX0 476 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 C1QL4Q86Z23 238 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 OR52L2PQ8NGH6 319 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A1W2PPE3 182 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 YPEL1O60688 119 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 SCAF4O95104 1147 aaKnown RBP12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 MSMBP08118 114 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 IGHV1-8P0DP01 117 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 RAB2AP61019 212 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 C1orf122Q6ZSJ8 110 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
TM9SF1-202ENST00000396854 MAP1AP78559 2803 aaPredicted RBP12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A087X0M5 115 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A1B0GX30 115 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 H3BQ15 152 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 OR2C1O95371 312 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 IGLV2-14P01704 120 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 Q8N7P7 452 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 ONECUT1Q9UBC0 465 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 INSIG2Q9Y5U4 225 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.09□□□□□ -0.474e-7■■■■■ 29.1
TM9SF1-202ENST00000396854 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 A0A087WWC5 75 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 IGHV3-43A0A0B4J1X8 118 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 IFNA5P01569 189 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 IGKV1-39P01597 117 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 IGKV1D-39P04432 117 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 IGHV3-43DP0DP04 118 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 CEACAM6P40199 344 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 B2MP61769 119 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 MSMO1Q15800 293 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 HAGHQ16775 308 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 LTC4SQ16873 150 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 Q3ZCU0 254 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 MORN2Q502X0 79 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 BTNL3Q6UXE8 466 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms