RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 SH3BGRL2Q9UJC5 107 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 MGAQ8IWI9 3026 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 APC2O95996 2303 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 ACACAQ13085 2346 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 ICE1Q9Y2F5 2266 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 TMEM178BH3BS89 294 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 CYB5BO43169 146 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 HRASP01112 189 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 CD81P60033 236 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 MEF2BQ02080 365 aaPredicted RBP13.78□□□□□ -0.2
NUP50-202ENST00000396096 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 RAB24Q969Q5 203 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 GAL3ST2Q9H3Q3 398 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 NGBQ9NPG2 151 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 SLC25A10Q9UBX3 287 aaPredicted RBP13.78□□□□□ -0.2
NUP50-202ENST00000396096 RP1L1Q8IWN7 2480 aaPredicted RBP13.77□□□□□ -0.21
NUP50-202ENST00000396096 RRHO14718 337 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 TNFRSF13BO14836 293 aaPredicted RBP13.77□□□□□ -0.21
NUP50-202ENST00000396096 TMPRSS2O15393 492 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 HSPE1P61604 102 aaKnown RBP13.77□□□□□ -0.21
NUP50-202ENST00000396096 TMEM170AQ8WVE7 144 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 RND1Q92730 232 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 WFIKKN1Q96NZ8 548 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 SAP30LQ9HAJ7 183 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 SDF2L1Q9HCN8 221 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 TMEM242Q9NWH2 141 aa13.77□□□□□ -0.21
NUP50-202ENST00000396096 PPIAL4EA0A075B759 164 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 ZNF727A8MUV8 499 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 PPIAL4DF5H284 164 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 TMEM250H0YL14 139 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 PPIAL4FP0DN26 164 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 NDUFB7P17568 137 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 PSMB3P49720 205 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 GNG10P50151 68 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 HNF4GQ14541 408 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 WDR25Q64LD2 544 aaPredicted RBP13.76□□□□□ -0.21
NUP50-202ENST00000396096 ADAM5Q6NVV9 412 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 TREML4Q6UXN2 200 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 RAB1CQ92928 201 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 VKORC1Q9BQB6 163 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 PPIAL4AQ9Y536 164 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 C5orf52A6NGY3 159 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 SHISA9B4DS77 424 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 CT45A6P0DMU7 189 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 CT45A5P0DMU8 189 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 CT45A7P0DMV0 189 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 OPRK1P41145 380 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 NCMAPQ5T1S8 102 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 ZNF833PQ6ZTB9 187 aa13.76□□□□□ -0.21
NUP50-202ENST00000396096 BOD1L1Q8NFC6 3051 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
NUP50-202ENST00000396096 ELOBQ15370 118 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 ZCCHC24Q8N2G6 241 aaKnown RBP13.75□□□□□ -0.21
NUP50-202ENST00000396096 ABHD12Q8N2K0 398 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 RNASE6Q93091 150 aaKnown RBP13.75□□□□□ -0.21
NUP50-202ENST00000396096 TMPRSS5Q9H3S3 457 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 TMEM106BQ9NUM4 274 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 PRNDQ9UKY0 176 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 ZNF257Q9Y2Q1 563 aa13.75□□□□□ -0.21
NUP50-202ENST00000396096 ATXN7O15265 892 aaPredicted RBP13.74□□□□□ -0.21
NUP50-202ENST00000396096 FCN3O75636 299 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
NUP50-202ENST00000396096 PLA2G5P39877 138 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 RPL31P62899 125 aaKnown RBP13.74□□□□□ -0.21
NUP50-202ENST00000396096 RTL8BQ17RB0 113 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 DMRTC2Q8IXT2 367 aaPredicted RBP13.74□□□□□ -0.21
NUP50-202ENST00000396096 MSRB2Q9Y3D2 182 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 UPK2O00526 184 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 RND2P52198 227 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 SLC24A4Q8NFF2 622 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 Q8WTZ3 238 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 ZNF714Q96N38 554 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 MS4A5Q9H3V2 200 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 SLC35D1Q9NTN3 355 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 NAT8Q9UHE5 227 aa13.74□□□□□ -0.21
NUP50-202ENST00000396096 LSM4Q9Y4Z0 139 aaKnown RBP13.74□□□□□ -0.21
NUP50-202ENST00000396096 SMCO3A2RU48 225 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 E7EQL1 145 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 FNDC10F2Z333 226 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 UBE2CO00762 179 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 HMGB3O15347 200 aaKnown RBP13.73□□□□□ -0.21
NUP50-202ENST00000396096 KBTBD11O94819 623 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 NPY1RP25929 384 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 SNRPEP62304 92 aaKnown RBP13.73□□□□□ -0.21
NUP50-202ENST00000396096 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 C8orf31Q8N9H6 132 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 OR13D1Q8NGV5 346 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 MGST2Q99735 147 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 ENY2Q9NPA8 101 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 KCNIP2Q9NS61 270 aa13.73□□□□□ -0.21
NUP50-202ENST00000396096 YLPM1P49750 1951 aaKnown RBP13.73□□□□□ -0.21
NUP50-202ENST00000396096 YIF1AO95070 293 aa13.72□□□□□ -0.21
NUP50-202ENST00000396096 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
NUP50-202ENST00000396096 S100A6P06703 90 aa13.72□□□□□ -0.21
NUP50-202ENST00000396096 RPL35P42766 123 aaKnown RBP13.72□□□□□ -0.21
NUP50-202ENST00000396096 AKR1D1P51857 326 aa13.72□□□□□ -0.21
NUP50-202ENST00000396096 EFNB3Q15768 340 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms