RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
MKS1-202ENST00000393119 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
MKS1-202ENST00000393119 SPG11Q96JI7 2443 aa12.23□□□□□ -0.45
MKS1-202ENST00000393119 DOPEY1Q5JWR5 2465 aa12.23□□□□□ -0.45
MKS1-202ENST00000393119 DYNLT3P51808 116 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 HNF4GQ14541 408 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 SLC25A48Q6ZT89 311 aaKnown RBP12.22□□□□□ -0.45
MKS1-202ENST00000393119 DDB2Q92466 427 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 QTRT1Q9BXR0 403 aaKnown RBP12.22□□□□□ -0.45
MKS1-202ENST00000393119 PLEKHA2Q9HB19 425 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 LYRM2Q9NU23 88 aaPredicted RBP12.22□□□□□ -0.45
MKS1-202ENST00000393119 RBMXL2O75526 392 aaKnown RBP12.22□□□□□ -0.45
MKS1-202ENST00000393119 SNRNP70P08621 437 aaKnown RBP12.22□□□□□ -0.45
MKS1-202ENST00000393119 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 SULT1A1P50225 295 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 RAB5CP51148 216 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 OR5C1Q8NGR4 320 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 RBKSQ9H477 322 aa12.22□□□□□ -0.45
MKS1-202ENST00000393119 RAB29O14966 203 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 SYNGR2O43760 224 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 METTL15P1P0C7V9 234 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 IGFBP2P18065 325 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 FHITP49789 147 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 MEF2CQ06413 473 aaPredicted RBP12.21□□□□□ -0.45
MKS1-202ENST00000393119 C9orf152Q5JTZ5 239 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 HAPLN4Q86UW8 402 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 ZNF843Q8N446 348 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 FBN2P35556 2912 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 CENPEQ02224 2701 aa12.21□□□□□ -0.45
MKS1-202ENST00000393119 SRRM4A7MD48 611 aaKnown RBP12.21□□□□□ -0.46
MKS1-202ENST00000393119 C22orf46C9J442 243 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 CDX1P47902 265 aaPredicted RBP12.21□□□□□ -0.46
MKS1-202ENST00000393119 RAB2AP61019 212 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 TMEM155Q4W5P6 130 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 SPANXN5Q5MJ07 72 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 S1PR3Q99500 378 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 MRPL20Q9BYC9 149 aaKnown RBP12.21□□□□□ -0.46
MKS1-202ENST00000393119 GAL3ST2Q9H3Q3 398 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 PRDM13Q9H4Q3 707 aa12.21□□□□□ -0.46
MKS1-202ENST00000393119 A6NNC1 897 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 JTBO76095 146 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 UBE2KP61086 200 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 DTX2Q86UW9 622 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 OPN1MWP04001 364 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 RUNX1Q01196 453 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 TNFRSF9Q07011 255 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 GUK1Q16774 197 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 AKIRIN2Q53H80 203 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 DNLZQ5SXM8 178 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 NRGNQ92686 78 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
MKS1-202ENST00000393119 FAM208BQ5VWN6 2430 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 GPR37O15354 613 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 IGHV1-8P0DP01 117 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 RAB7AP51149 207 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.46
MKS1-202ENST00000393119 GPR157Q5UAW9 335 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 WDR25Q64LD2 544 aaPredicted RBP12.19□□□□□ -0.46
MKS1-202ENST00000393119 CDPF1Q6NVV7 123 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 RITA1Q96K30 269 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 LRRK2Q5S007 2527 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 A0A1B0GW64 132 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 ARG1P05089 322 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 SLC25A6P12236 298 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 COX7A1P24310 79 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 C14orf144Q96I85 54 aa12.19□□□□□ -0.46
MKS1-202ENST00000393119 HPRT1P00492 218 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 PAX1P15863 534 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 ZNF525Q8N782 197 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 PFDN5Q99471 154 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 PPIAL4CA0A0B4J2A2 164 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 A0A1W2PRD5 423 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 A0A1W2PRF3 423 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 A0A1W2PRM7 423 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 J3QR06 171 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 IFNA17P01571 189 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 SEC11BP0C7V7 166 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 PPIAL4GP0DN37 164 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 MSMO1Q15800 293 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 OR8G2PQ6IF36 304 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 SIRT7Q9NRC8 400 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 TMEM140Q9NV12 185 aa12.18□□□□□ -0.46
MKS1-202ENST00000393119 A0A1B0GV50 99 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 A1L4Q6 167 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 YIF1AO95070 293 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 TSPAN15O95858 294 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 ARF6P62330 175 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms