RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 VDAC2P45880 294 aaPredicted RBP16.4■□□□□ 0.22
PTPN11-202ENST00000392597 OR4A47Q6IF82 309 aa16.4■□□□□ 0.22
PTPN11-202ENST00000392597 EIF5A2Q9GZV4 153 aaKnown RBP16.4■□□□□ 0.22
PTPN11-202ENST00000392597 CBLN4Q9NTU7 201 aa16.4■□□□□ 0.22
PTPN11-202ENST00000392597 KPTNQ9Y664 436 aa16.4■□□□□ 0.22
PTPN11-202ENST00000392597 IL6RP08887 468 aaPredicted RBP16.39■□□□□ 0.22
PTPN11-202ENST00000392597 COL8A2P25067 703 aa16.39■□□□□ 0.22
PTPN11-202ENST00000392597 SPINK9Q5DT21 86 aa16.39■□□□□ 0.22
PTPN11-202ENST00000392597 RBMXL1Q96E39 390 aaKnown RBP16.39■□□□□ 0.22
PTPN11-202ENST00000392597 RAB1BQ9H0U4 201 aa16.39■□□□□ 0.22
PTPN11-202ENST00000392597 TCF19Q9Y242 345 aa16.39■□□□□ 0.22
PTPN11-202ENST00000392597 FLNCQ14315 2725 aa16.39■□□□□ 0.21
PTPN11-202ENST00000392597 TRAV3A0A0B4J244 114 aa16.39■□□□□ 0.21
PTPN11-202ENST00000392597 ERVFRD-1P60508 538 aa16.39■□□□□ 0.21
PTPN11-202ENST00000392597 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-202ENST00000392597 OR13D1Q8NGV5 346 aa16.39■□□□□ 0.21
PTPN11-202ENST00000392597 RPRMQ9NS64 109 aa16.39■□□□□ 0.21
PTPN11-202ENST00000392597 J3QR06 171 aa16.38■□□□□ 0.21
PTPN11-202ENST00000392597 APOA2P02652 100 aa16.38■□□□□ 0.21
PTPN11-202ENST00000392597 ZNF137PP52743 207 aa16.38■□□□□ 0.21
PTPN11-202ENST00000392597 TMEM41BQ5BJD5 291 aa16.38■□□□□ 0.21
PTPN11-202ENST00000392597 OSR1Q8TAX0 266 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-202ENST00000392597 TMEM186Q96B77 213 aa16.38■□□□□ 0.21
PTPN11-202ENST00000392597 HEYLQ9NQ87 328 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-202ENST00000392597 PRNDQ9UKY0 176 aa16.38■□□□□ 0.21
PTPN11-202ENST00000392597 J3QKU1 62 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 MDKP21741 143 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 PPT1P50897 306 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 HSPE1P61604 102 aaKnown RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 C11orf71Q6IPW1 123 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 OR5AN1Q8NGI8 311 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 OR10X1Q8NGY0 326 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 OR9G1Q8NH87 305 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 SFT2D1Q8WV19 159 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 ITLN2Q8WWU7 325 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 MBD3L1Q8WWY6 194 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 GGACTQ9BVM4 153 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 ZNRD1Q9P1U0 126 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 ZNF257Q9Y2Q1 563 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 TET2Q6N021 2002 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 DNASE2O00115 360 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 IGHV1-8P0DP01 117 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 MRPL20Q9BYC9 149 aaKnown RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 SLC35B3Q9H1N7 401 aa16.37■□□□□ 0.21
PTPN11-202ENST00000392597 USP9XQ93008 2570 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-202ENST00000392597 DOPEY1Q5JWR5 2465 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 RBFOX3A6NFN3 312 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 IFNA10P01566 189 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 CCL20P78556 96 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 ZNF841Q6ZN19 808 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 TNFRSF14Q92956 283 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
PTPN11-202ENST00000392597 A0A1B0GV50 99 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 A0A1W2PPH5 198 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 H0YJW9 148 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 UPK2O00526 184 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 RBP4P02753 201 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 IGKV1-16P04430 117 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 HOXA1P49639 335 aaPredicted RBP16.35■□□□□ 0.21
PTPN11-202ENST00000392597 C11orf42Q8N5U0 333 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 NEU4Q8WWR8 484 aaPredicted RBP16.35■□□□□ 0.21
PTPN11-202ENST00000392597 ST6GALNAC6Q969X2 333 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 MBP02144 154 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 FGF7P21781 194 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 TMEM177Q53S58 311 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 PCGF1Q9BSM1 259 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 TMEM133Q9H2Q1 129 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 FKBP11Q9NYL4 201 aa16.35■□□□□ 0.21
PTPN11-202ENST00000392597 SOX15O60248 233 aa16.34■□□□□ 0.21
PTPN11-202ENST00000392597 RAB11AP62491 216 aa16.34■□□□□ 0.21
PTPN11-202ENST00000392597 DTX2Q86UW9 622 aa16.34■□□□□ 0.21
PTPN11-202ENST00000392597 C8orf46Q8TAG6 207 aa16.34■□□□□ 0.21
PTPN11-202ENST00000392597 RCC1LQ96I51 464 aaKnown RBP16.34■□□□□ 0.21
PTPN11-202ENST00000392597 ENY2Q9NPA8 101 aa16.34■□□□□ 0.21
PTPN11-202ENST00000392597 MIOXQ9UGB7 285 aa16.34■□□□□ 0.21
PTPN11-202ENST00000392597 MPDU1O75352 247 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 IL3RAP26951 378 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 ZNF506Q5JVG8 444 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 PDPNQ86YL7 162 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 ABHD12Q8N2K0 398 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 ZNF709Q8N972 641 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 NABP2Q9BQ15 211 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 NPCDR1Q9BY65 106 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 VSIRQ9H7M9 311 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 WDR83OSQ9Y284 106 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 OR51B2Q9Y5P1 312 aa16.33■□□□□ 0.21
PTPN11-202ENST00000392597 FAM74A7A6NL05 159 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 SRRM4A7MD48 611 aaKnown RBP16.33■□□□□ 0.2
PTPN11-202ENST00000392597 PRSS46E5RG02 174 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 C17orf112F2Z3M2 114 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 F12P00748 615 aaPredicted RBP16.33■□□□□ 0.2
PTPN11-202ENST00000392597 CD1BP29016 333 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 DLK1P80370 383 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 ZNF726P1Q15940 193 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 FAM74A3Q4VXF1 159 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 ETV3LQ6ZN32 361 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 CLRN3Q8NCR9 226 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 OR8B3Q8NGG8 313 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms