RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 IGLV3-16A0A075B6K0 115 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TRBV19A0A075B6N1 114 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TRAV9-1A0A075B6T8 112 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 A0A087WUU8 490 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TRAV4A0A0B4J268 109 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TMEM269A0A1B0GVZ9 245 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 DHRS12A0PJE2 317 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 IGSF23A1L1A6 192 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 C7orf66A4D0T2 115 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 GRIFINA4D1Z8 144 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 MAP1LC3B2A6NCE7 125 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 A6NED7 52 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 DPRXA6NFQ7 191 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SIGLEC16A6NMB1 481 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 CYSRT1A8MQ03 144 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 A8MUU9 505 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 A8MWP6 167 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 C16orf90A8MZG2 172 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 E7EQ34 232 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 H3BQ85 93 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 J3QRK9 145 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 UBE2L6O14933 153 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LECT2O14960 151 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SLC25A20O43772 301 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 ZNF324O75467 553 aaPredicted RBP1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 IFNA7P01567 189 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 IGHV3-53P01767 116 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 APOA2P02652 100 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LGALS1P09382 135 aaKnown RBP1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 CPMP14384 443 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 RPS4Y1P22090 263 aaKnown RBP1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 NPY1RP25929 384 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 CRYBB3P26998 211 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 CRABP1P29762 137 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 BLVRBP30043 206 aaPredicted RBP1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 GABRA2P47869 451 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SERPINB10P48595 397 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 RAB13P51153 203 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TSPEAR-AS2P59090 65 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 NCALDP61601 193 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 GNG5P63218 68 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 HBA1P69905 142 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SMCO1Q147U7 214 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LGALS9BQ3B8N2 356 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SCGB2B2Q4G0G5 96 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TMEM69Q5SWH9 247 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LDLRAD2Q5SZI1 272 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LGALS9CQ6DKI2 356 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 DCUN1D2Q6PH85 259 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 Q6Q795 121 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 ADM2Q7Z4H4 148 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 OSR2Q8N2R0 312 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 FAM24BQ8N5W8 94 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 DAND5Q8N907 189 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 Q8N9L7 120 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 OR13C4Q8NGS5 318 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 OR13D1Q8NGV5 346 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 OR10J5Q8NHC4 309 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LMX1AQ8TE12 382 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 ACOT12Q8WYK0 555 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 RNASE6Q93091 150 aaKnown RBP1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TOMM6Q96B49 74 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 MALSU1Q96EH3 234 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 C2orf50Q96LR7 162 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 IGF2BP2-AS1Q96M15 143 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 ERMAPQ96PL5 475 aaPredicted RBP1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 LYSMD1Q96S90 227 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SERPINI1Q99574 410 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 MAP1LC3BQ9GZQ8 125 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 PBOV1Q9GZY1 135 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 C11orf1Q9H5F2 150 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 RNF122Q9H9V4 155 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 EFCAB1Q9HAE3 211 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 XAGE1AQ9HD64 81 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 TVP23BQ9NYZ1 205 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 OR5V1Q9UGF6 321 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 CELA1Q9UNI1 258 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 S4R3C0 116 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 PTPRJQ12913 1337 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 ABCC12Q96J65 1359 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 NUP160Q12769 1436 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 SETD5Q9C0A6 1442 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 PLA2R1Q13018 1463 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 PEG3Q9GZU2 1588 aa1.04□□□□□ -2.24
TRAJ39-201ENST00000390498 KIF1BO60333 1816 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 TICRRQ7Z2Z1 1910 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 ARHGAP21Q5T5U3 1957 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 IGLV3-12A0A075B6K2 115 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 IGHV3OR16-8A0A075B7F1 116 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 TRAV38-1A0A0B4J264 116 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 A0A0B4J2C4 111 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 KRTAP4-8A0A0G2JLE6 195 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 A0A1W2PRE2 83 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 ZNF98A6NK75 572 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 C17orf51A8MQB3 221 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 KPNA4O00629 521 aaPredicted RBP1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 PIAS1O75925 651 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 OR2J2O76002 312 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 GAS8-AS1O95177 125 aa1.03□□□□□ -2.24
TRAJ39-201ENST00000390498 IFNA10P01566 189 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms