RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 WFDC10AQ9H1F0 79 aa10.73□□□□□ -0.69
SHOX-202ENST00000381575 TUBA4BQ9H853 241 aa10.73□□□□□ -0.69
SHOX-202ENST00000381575 DNAH1Q9P2D7 4330 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 TRAV18A0A075B6X5 111 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.72□□□□□ -0.69
SHOX-202ENST00000381575 A8MZ25 164 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
SHOX-202ENST00000381575 MRPS14O60783 128 aaKnown RBP10.72□□□□□ -0.69
SHOX-202ENST00000381575 REG1AP05451 166 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 AREGP15514 252 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 RPL27AP46776 148 aaKnown RBP10.72□□□□□ -0.69
SHOX-202ENST00000381575 ARPC4P59998 168 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
SHOX-202ENST00000381575 IDNKQ5T6J7 187 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 TPRA1Q86W33 373 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 Q8N402 240 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 MFSD4AQ8N468 514 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 FCGR1BQ92637 280 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 CENPOQ9BU64 300 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 EDA2RQ9HAV5 297 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 CCL28Q9NRJ3 127 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 PEMTQ9UBM1 199 aa10.72□□□□□ -0.69
SHOX-202ENST00000381575 DPPA5A6NC42 116 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 MEIS3P1A6NDR6 274 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 FCGR2CP31995 323 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 CD81P60033 236 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 NEDD8Q15843 81 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 PUSL1Q8N0Z8 303 aaKnown RBP10.71□□□□□ -0.69
SHOX-202ENST00000381575 NECAP1Q8NC96 275 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 BEST4Q8NFU0 473 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 TMEM167AQ8TBQ9 72 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 DYNLRB2Q8TF09 96 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 CACNG8Q8WXS5 425 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 ISOC1Q96CN7 298 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 OR2A7Q96R45 310 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 HSD17B10Q99714 261 aaKnown RBP10.71□□□□□ -0.69
SHOX-202ENST00000381575 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 FBXL7Q9UJT9 491 aa10.71□□□□□ -0.69
SHOX-202ENST00000381575 SCGNO76038 276 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 SLC22A5O76082 557 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 NDUFB8O95169 186 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 OR2C1O95371 312 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 CD7P09564 240 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 TGFBR1P36897 503 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 MECP2P51608 486 aaKnown RBP10.7□□□□□ -0.7
SHOX-202ENST00000381575 FXYD4P59646 89 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 ZNF773Q6PK81 442 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 OR13F1Q8NGS4 319 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 ZC4H2Q9NQZ6 224 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 SIGLEC8Q9NYZ4 499 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 ZNF257Q9Y2Q1 563 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 DMRT1Q9Y5R6 373 aa10.7□□□□□ -0.7
SHOX-202ENST00000381575 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 SULT1C2O00338 296 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 ZNF735P0CB33 412 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 RPA2P15927 270 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 GUCA2BQ16661 112 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 CLEC19AQ6UXS0 136 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 SLC25A42Q86VD7 318 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 DEFB125Q8N687 156 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 WDR89Q96FK6 387 aaPredicted RBP10.69□□□□□ -0.7
SHOX-202ENST00000381575 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 NEURL2Q9BR09 285 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 SLC5A7Q9GZV3 580 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 Q9H521 79 aa10.69□□□□□ -0.7
SHOX-202ENST00000381575 TRAV3A0A0B4J244 114 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 MFSD2BA6NFX1 497 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 CGB1A6NKQ9 187 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 ZNF785A8K8V0 405 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 NPIPB5A8MRT5 1133 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 PPYP01298 95 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 FOLR2P14207 255 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 RPL8P62917 257 aaKnown RBP10.68□□□□□ -0.7
SHOX-202ENST00000381575 DEFB114Q30KQ6 69 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 TIMM50Q3ZCQ8 353 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 OR4A47Q6IF82 309 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 ZNF66Q6ZN08 573 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 TMEM17Q86X19 198 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 SPAG16Q8N0X2 631 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 VSTM2AQ8TAG5 236 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 AUNIPQ9H7T9 357 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 HRASLSQ9HDD0 168 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 ETV7Q9Y603 341 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 CEPT1Q9Y6K0 416 aa10.68□□□□□ -0.7
SHOX-202ENST00000381575 AIREO43918 545 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 GGCTO75223 188 aaKnown RBP10.67□□□□□ -0.7
SHOX-202ENST00000381575 HRASP01112 189 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 HLA-GP17693 338 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 PSMB6P28072 239 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 ARL3P36405 182 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 HOGA1Q86XE5 327 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 OR51H1Q8NH63 302 aa10.67□□□□□ -0.7
SHOX-202ENST00000381575 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
SHOX-202ENST00000381575 YTHDF1Q9BYJ9 559 aaKnown RBP10.67□□□□□ -0.7
SHOX-202ENST00000381575 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
SHOX-202ENST00000381575 ZNF320A2RRD8 509 aa10.66□□□□□ -0.7
SHOX-202ENST00000381575 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms