RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TRIM16LQ309B1 348 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 AIFM2Q9BRQ8 373 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 ZNF430Q9H8G1 570 aaPredicted RBP10.01□□□□□ -0.81
SMN1-202ENST00000380707 PALMDQ9NP74 551 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 SERTAD4Q9NUC0 356 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 TMEM140Q9NV12 185 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 NUBP2Q9Y5Y2 271 aa10.01□□□□□ -0.81
SMN1-202ENST00000380707 TRAV3A0A0B4J244 114 aa10□□□□□ -0.81
SMN1-202ENST00000380707 TMEM89A2RUT3 159 aa10□□□□□ -0.81
SMN1-202ENST00000380707 IGKV1-5P01602 117 aa10□□□□□ -0.81
SMN1-202ENST00000380707 H2AFB2P0C5Z0 115 aa10□□□□□ -0.81
SMN1-202ENST00000380707 OR4E1P0C645 316 aa10□□□□□ -0.81
SMN1-202ENST00000380707 RAB25P57735 213 aa10□□□□□ -0.81
SMN1-202ENST00000380707 UBE2MP61081 183 aaKnown RBP10□□□□□ -0.81
SMN1-202ENST00000380707 CX3CL1P78423 397 aa10□□□□□ -0.81
SMN1-202ENST00000380707 NDPQ00604 133 aa10□□□□□ -0.81
SMN1-202ENST00000380707 DCTN2Q13561 401 aaKnown RBP10□□□□□ -0.81
SMN1-202ENST00000380707 PRSS8Q16651 343 aa10□□□□□ -0.81
SMN1-202ENST00000380707 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
SMN1-202ENST00000380707 SLC35E3Q7Z769 313 aa10□□□□□ -0.81
SMN1-202ENST00000380707 SELENOHQ8IZQ5 122 aaKnown RBP10□□□□□ -0.81
SMN1-202ENST00000380707 VSTM2AQ8TAG5 236 aa10□□□□□ -0.81
SMN1-202ENST00000380707 TMEM56Q96MV1 263 aa10□□□□□ -0.81
SMN1-202ENST00000380707 BET1LQ9NYM9 111 aa10□□□□□ -0.81
SMN1-202ENST00000380707 TMEM56-RWDD3S4R434 201 aa10□□□□□ -0.81
SMN1-202ENST00000380707 TNCP24821 2201 aa10□□□□□ -0.81
SMN1-202ENST00000380707 SFT2D2O95562 160 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 ANXA3P12429 323 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 SPNP16150 400 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 VDAC2P45880 294 aaPredicted RBP9.99□□□□□ -0.81
SMN1-202ENST00000380707 ERVK-16P61578 105 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 GNB1P62873 340 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 DHRS2Q13268 280 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 ANKRD55Q3KP44 614 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 C4orf46Q504U0 113 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 ARSJQ5FYB0 599 aaPredicted RBP9.99□□□□□ -0.81
SMN1-202ENST00000380707 TMEM167AQ8TBQ9 72 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
SMN1-202ENST00000380707 NOL4LQ96MY1 436 aaPredicted RBP9.99□□□□□ -0.81
SMN1-202ENST00000380707 MDFIQ99750 246 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 ALX4Q9H161 411 aaPredicted RBP9.99□□□□□ -0.81
SMN1-202ENST00000380707 OR51J1Q9H342 316 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 DNHD1Q96M86 4753 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 TRRAPQ9Y4A5 3859 aa9.99□□□□□ -0.81
SMN1-202ENST00000380707 C9orf170A2RU37 121 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 UPK2O00526 184 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 KCNAB3O43448 404 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 CNIH1O95406 144 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 HLA-AP01891 365 aaKnown RBP9.98□□□□□ -0.81
SMN1-202ENST00000380707 OR9G9P0C7N8 305 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 P0C879 139 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 EGR2P11161 476 aaPredicted RBP9.98□□□□□ -0.81
SMN1-202ENST00000380707 MECP2P51608 486 aaKnown RBP9.98□□□□□ -0.81
SMN1-202ENST00000380707 FOXL1Q12952 345 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 FXYD3Q14802 87 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 IZUMO4Q1ZYL8 232 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 TMEM268Q5VZI3 342 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 ZNF695Q8IW36 515 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 MMD2Q8IY49 270 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 CADM3Q8N126 398 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 OR52B4Q8NGK2 314 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 CASTOR1Q8WTX7 329 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 PARP11Q9NR21 331 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 NSG2Q9Y328 171 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 FBXO7Q9Y3I1 522 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 RNF114Q9Y508 228 aa9.98□□□□□ -0.81
SMN1-202ENST00000380707 A0A0G2JRQ6 117 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 IGF1P05019 195 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 MYOD1P15172 320 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 AKR1C2P52895 323 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
SMN1-202ENST00000380707 TNXAQ16473 311 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 PLET1Q6UQ28 207 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 H2BFWTQ7Z2G1 175 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 LYZL2Q7Z4W2 148 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 LYG2Q86SG7 212 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 SLC35G3Q8N808 338 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 IL22RA2Q969J5 263 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 MARVELD1Q9BSK0 173 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 FAM103A1Q9BTL3 118 aaKnown RBP9.97□□□□□ -0.81
SMN1-202ENST00000380707 MMP24Q9Y5R2 645 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 A0A0B4J293 547 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 DBX1A6NMT0 343 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 E7EUB6 86 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 AP4M1O00189 453 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
SMN1-202ENST00000380707 ATG12O94817 140 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 PTTG1O95997 202 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 OPN1MWP04001 364 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 OPN1MW2P0DN77 364 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 OPN1MW3P0DN78 364 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 HLA-GP17693 338 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 COMPP49747 757 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms