RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TRGC1P0CF51 173 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 HINT1P49773 126 aaPredicted RBP13.63□□□□□ -0.23
COL2A1-202ENST00000380518 ELOVL5Q9NYP7 299 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 PTPRFP10586 1907 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 PNKDQ8N490 385 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 OR10AG1Q8NH19 301 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 TDRD6O60522 2096 aaKnown RBP13.63□□□□□ -0.23
COL2A1-202ENST00000380518 KIAA1644Q3SXP7 199 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 LAMTOR1Q6IAA8 161 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 SLC25A34Q6PIV7 304 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 FDCSPQ8NFU4 85 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 NUDT3O95989 172 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 OR4A47Q6IF82 309 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 OSR1Q8TAX0 266 aaPredicted RBP13.62□□□□□ -0.23
COL2A1-202ENST00000380518 LOC102724200A0A096LPH7 203 aaPredicted RBP13.62□□□□□ -0.23
COL2A1-202ENST00000380518 GAGE10A6NGK3 116 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 MSGN1A6NI15 193 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 HLA-DRB1P01911 266 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 DDTP30046 118 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 AMMECR1LQ6DCA0 310 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 ACP7Q6ZNF0 438 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 OR10S1Q8NGN2 331 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 SIGLEC12Q96PQ1 595 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 PIMREGQ9BSJ6 248 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 RRHO14718 337 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 ATP5G2Q06055 141 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 GOLT1AQ6ZVE7 132 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 NEU1Q99519 415 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 RTN4RQ9BZR6 473 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 AICDAQ9GZX7 198 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 A0A0B4J293 547 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 H3BTX0 84 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 FABP2P12104 132 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 NPPCP23582 126 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 GGACTQ9BVM4 153 aa13.62□□□□□ -0.23
COL2A1-202ENST00000380518 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
COL2A1-202ENST00000380518 PRR19A6NJB7 356 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 IGLV3-19P01714 112 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 RPL39P5Q59GN2 51 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 AKAP6Q13023 2319 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 ZNF883P0CG24 379 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 CENPWQ5EE01 88 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
COL2A1-202ENST00000380518 CECR9P0C854 216 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 RRN3P1Q2M238 152 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 ERASQ7Z444 233 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 IGHV3-48P01763 117 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 IL4P05112 153 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 IL6RP08887 468 aaPredicted RBP13.61□□□□□ -0.23
COL2A1-202ENST00000380518 CELA3AP09093 270 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 C1QTNF5Q9BXJ0 243 aa13.61□□□□□ -0.23
COL2A1-202ENST00000380518 PIKFYVEQ9Y2I7 2098 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 RELQ04864 619 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 SAPCD1Q5SSQ6 148 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 NPCDR1Q9BY65 106 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 TNS1Q9HBL0 1735 aaKnown RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 ANKRD31Q8N7Z5 1873 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 C1orf162Q8NEQ5 155 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 REPIN1Q9BWE0 567 aaKnown RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 ATAD5Q96QE3 1844 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 LNP1A1A4G5 178 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 CYP2G1PQ6ZSU1 146 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 FOXD3Q9UJU5 478 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 LOC107984156A0A0G2JMH3 177 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 A0A1B0GTI1 187 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 EGR1P18146 543 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 GPX4P36969 197 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-202ENST00000380518 ARL17AQ8IVW1 177 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
COL2A1-202ENST00000380518 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 GPX1P07203 203 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 TSPOP30536 169 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 HERPUD1Q15011 391 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 RSPO4Q2I0M5 234 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 PEAR1Q5VY43 1037 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 MBNL2Q5VZF2 373 aaKnown RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 CNOT1A5YKK6 2376 aaKnown RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 MOSP00540 346 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 APOBEC3AP31941 199 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 ATP5J2P56134 94 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 FADS6Q8N9I5 356 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 IFI27L2Q9H2X8 130 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 CARHSP1Q9Y2V2 147 aaKnown RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 COL11A1P12107 1806 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 TM4SF5O14894 197 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 FOXH1O75593 365 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 LINC00305Q7Z4B0 112 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 LINC00518Q8N0U6 118 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 VWCEQ96DN2 955 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 IMMP1LQ96LU5 166 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 CHODLQ9H9P2 273 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 LRRC37AA6NMS7 1700 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 TUBGCP6Q96RT7 1819 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 IGKV3D-15A0A087WSY6 115 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms