RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FBXO24O75426 580 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 VDAC1P21796 283 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 SLC35B1P78383 322 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 OR4A47Q6IF82 309 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 SSX9Q7RTT3 188 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 MMD2Q8IY49 270 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 COMMD1Q8N668 190 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 MINDY2Q8NBR6 621 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 ARPC1AQ92747 370 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 TRAV41A0A0B4J266 112 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 CRYM-AS1A6NIL9 109 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 CENPXA8MT69 81 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 CNIH1O95406 144 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 IGKV1-39P01597 117 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 IGHG4P01861 327 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 IGKV1D-39P04432 117 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 FGF2P09038 288 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 RPA2P15927 270 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 GNB1P62873 340 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 TMEM267Q0VDI3 215 aaPredicted RBP14.7□□□□□ -0.06
SSU72-203ENST00000378725 AKIRIN2Q53H80 203 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 C11orf44Q8N8P7 122 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 ADAD2Q8NCV1 583 aaKnown RBP14.7□□□□□ -0.06
SSU72-203ENST00000378725 OR4X2Q8NGF9 303 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 TMEM230Q96A57 120 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 NAA60Q9H7X0 242 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 WSB1Q9Y6I7 421 aa14.7□□□□□ -0.06
SSU72-203ENST00000378725 TEX13DA0A0J9YY54 714 aaPredicted RBP14.69□□□□□ -0.06
SSU72-203ENST00000378725 LINC00854A0A1B0GVQ3 168 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 MARCH11A6NNE9 402 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 UPK2O00526 184 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 KRASP01116 189 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 SERPINE2P07093 398 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 UCP1P25874 307 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 BTCP35070 178 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 MAS1LP35410 378 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 SP6Q3SY56 376 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 TEX38Q6PEX7 206 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 RNF152Q8N8N0 203 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 DMBX1Q8NFW5 382 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 SEC22AQ96IW7 307 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 CITED2Q99967 270 aaPredicted RBP14.69□□□□□ -0.06
SSU72-203ENST00000378725 FAM103A1Q9BTL3 118 aaKnown RBP14.69□□□□□ -0.06
SSU72-203ENST00000378725 TMEM140Q9NV12 185 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 STAB1Q9NY15 2570 aa14.69□□□□□ -0.06
SSU72-203ENST00000378725 IGLV1-40P01703 118 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 G6PCP35575 357 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 CCR6P51684 374 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 ERVK-16P61578 105 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 FOXE3Q13461 319 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 RBMS2Q15434 407 aaKnown RBP14.68□□□□□ -0.06
SSU72-203ENST00000378725 TNXAQ16473 311 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 LFNGQ8NES3 379 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 ABHD5Q8WTS1 349 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 GLYATL2Q8WU03 294 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 GALNT14Q96FL9 552 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 TMEM68Q96MH6 324 aa14.68□□□□□ -0.06
SSU72-203ENST00000378725 TRAV3A0A0B4J244 114 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 MSGN1A6NI15 193 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 ACTL6BO94805 426 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 NDUFB6O95139 128 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 CDS2O95674 445 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 ELANEP08246 267 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 OR5AC1P0C628 307 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 RPL8P62917 257 aaKnown RBP14.67□□□□□ -0.06
SSU72-203ENST00000378725 DHODHQ02127 395 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 HIST2H2BDQ6DRA6 164 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 UNQ5815/PRO19632Q6UWF5 114 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 NDUFA11Q86Y39 141 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 SGPP2Q8IWX5 399 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 GRPEL2Q8TAA5 225 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 SRSF12Q8WXF0 261 aaKnown RBP14.67□□□□□ -0.06
SSU72-203ENST00000378725 TMEM222Q9H0R3 208 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 KCNIP3Q9Y2W7 256 aa14.67□□□□□ -0.06
SSU72-203ENST00000378725 TCRBV4S1A1TA0A5B7 111 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 ADARB2-AS1A8MUL3 147 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 LYRM1O43325 122 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 OPN1MWP04001 364 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 OPN1MW2P0DN77 364 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 OPN1MW3P0DN78 364 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 HLA-GP17693 338 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 PSMB8P28062 276 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 SUPT4H1P63272 117 aaKnown RBP14.66□□□□□ -0.06
SSU72-203ENST00000378725 ECSCRQ19T08 205 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 ASPHD1Q5U4P2 390 aa14.66□□□□□ -0.06
SSU72-203ENST00000378725 FOXA2Q9Y261 457 aaPredicted RBP14.66□□□□□ -0.06
SSU72-203ENST00000378725 TSSC4Q9Y5U2 329 aaPredicted RBP14.66□□□□□ -0.06
SSU72-203ENST00000378725 E7EUB6 86 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 SOX15O60248 233 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 UPK1BO75841 260 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 P0C879 139 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 AKR1C4P17516 323 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 TRIM16LQ309B1 348 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 TMEM128Q5BJH2 165 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 C10orf55Q5SWW7 151 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 OR5M8Q8NGP6 311 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 TMEM56Q96MV1 263 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 ZFP57Q9NU63 452 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 TMEM56-RWDD3S4R434 201 aa14.65□□□□□ -0.06
SSU72-203ENST00000378725 A0A1B0GW64 132 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms