RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 IGHV3-20A0A0C4DH32 117 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 REG1AP05451 166 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 OR8B8Q15620 311 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 ACSM6Q6P461 480 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 SFTPA1Q8IWL2 248 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 LRRC75AQ8NAA5 344 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 ZC2HC1AQ96GY0 325 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 COMMD5Q9GZQ3 224 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 IL36GQ9NZH8 169 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 CACNG5Q9UF02 275 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 SBF1O95248 1867 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 hCG_38984A0A1B0GV85 526 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 CTLA4P16410 223 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 PEBP1P30086 187 aaKnown RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 KIR2DL2P43627 348 aaPredicted RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 LSRQ86X29 649 aaPredicted RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 OR5AN1Q8NGI8 311 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 ZNF576Q9H609 170 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 PTRH2Q9Y3E5 179 aaKnown RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 DOCK4Q8N1I0 1966 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 LILRA5A6NI73 299 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 RER1O15258 196 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 ASAH2BP0C7U1 165 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 GFERP55789 205 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 EIF3IQ13347 325 aaKnown RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 AAED1Q7RTV5 226 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 FGF14Q92915 247 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 STRADBQ9C0K7 418 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 TIMP3P35625 211 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 ZPLD1Q8TCW7 415 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 GREB1Q4ZG55 1949 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 PATJQ8NI35 1801 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 M0QXV9 152 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 GDF1P27539 372 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
NPHP4-202ENST00000378161 TRAT1Q6PIZ9 186 aa10.03□□□□□ -0.8
NPHP4-202ENST00000378161 SHISA8B8ZZ34 492 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 SPEM2Q0P670 501 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 C1orf53Q5VUE5 145 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 NAT6Q93015 286 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 FAM60AQ9NP50 221 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 BRWD1Q9NSI6 2320 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 A0A1W2PPC4 97 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 LRRC30A6NM36 301 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 ETV2O00321 342 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-202ENST00000378161 ZNF121P58317 390 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-202ENST00000378161 STPG3Q8N7X2 389 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 IL1F10Q8WWZ1 152 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-202ENST00000378161 OTOL1A6NHN0 477 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-202ENST00000378161 M0R135 149 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 FCN3O75636 299 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 CTRLP40313 264 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 ZIC4Q8N9L1 334 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 ZNF799Q96GE5 643 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 OXGR1Q96P68 337 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 VGLL1Q99990 258 aa10.02□□□□□ -0.81
NPHP4-202ENST00000378161 A0A1W2PNR3 127 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 EPPINO95925 133 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 PP6455Q8WZ26 134 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 ZNF256Q9Y2P7 627 aaPredicted RBP10.01□□□□□ -0.81
NPHP4-202ENST00000378161 DCAF12Q5T6F0 453 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 ANKRD36A6QL64 1941 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 A0A087WV48 116 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 IFITM1P13164 125 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 FOLR3P41439 243 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 CCL7P80098 99 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 TNXAQ16473 311 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 TMEM222Q9H0R3 208 aa10.01□□□□□ -0.81
NPHP4-202ENST00000378161 KIR2DS1A0A191URI9 304 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 EML2O95834 649 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 FXYD3Q14802 87 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 KIR2DS1Q14954 304 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 TMEM52Q8NDY8 209 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 R4GN57 208 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 DOCK9Q9BZ29 2069 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 TRAV8-2A0A0B4J237 113 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 FOXH1O75593 365 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 LHX2P50458 406 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 FOXF1Q12946 379 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 TM4SF19Q96DZ7 209 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 TNS1Q9HBL0 1735 aaKnown RBP10□□□□□ -0.81
NPHP4-202ENST00000378161 TNRC6AQ8NDV7 1962 aaKnown RBP10□□□□□ -0.81
NPHP4-202ENST00000378161 TMEM8BA6NDV4 472 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 IL4P05112 153 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 IFI6P09912 130 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 GATA2P23769 480 aaPredicted RBP10□□□□□ -0.81
NPHP4-202ENST00000378161 ATP5G2Q06055 141 aa10□□□□□ -0.81
NPHP4-202ENST00000378161 PSG5Q15238 335 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms