RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZNF585BQ52M93 769 aa10.4□□□□□ -0.74
CKAP2-202ENST00000378034 ZNF329Q86UD4 541 aa10.4□□□□□ -0.74
CKAP2-202ENST00000378034 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
CKAP2-202ENST00000378034 ABHD5Q8WTS1 349 aa10.4□□□□□ -0.74
CKAP2-202ENST00000378034 C7orf50Q9BRJ6 194 aaKnown RBP10.4□□□□□ -0.74
CKAP2-202ENST00000378034 RTBDNQ9BSG5 229 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-202ENST00000378034 CCDC32Q9BV29 185 aa10.4□□□□□ -0.74
CKAP2-202ENST00000378034 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-202ENST00000378034 ARPC1BO15143 372 aaKnown RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 ACTL6BO94805 426 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 IL7P13232 177 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 PPIFP30405 207 aaKnown RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 GNB1P62873 340 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 C2orf68Q2NKX9 166 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 C19orf54Q5BKX5 351 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 OR4A47Q6IF82 309 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 VKORC1L1Q8N0U8 176 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 C11orf44Q8N8P7 122 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 MINDY2Q8NBR6 621 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 R3HDM4Q96D70 268 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 CITED2Q99967 270 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 SLC25A21Q9BQT8 299 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 C5orf66Q9H5L9 145 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 TSSC4Q9Y5U2 329 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 C3orf85A0A1B0GTC6 90 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 CENPXA8MT69 81 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 SERPINE2P07093 398 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 SSBP2P81877 361 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-202ENST00000378034 TNXAQ16473 311 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 DMBX1Q8NFW5 382 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 ZFP57Q9NU63 452 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
CKAP2-202ENST00000378034 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 G3V318 75 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 IGLV1-40P01703 118 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 CD40LGP29965 261 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 CXorf66Q5JRM2 361 aaPredicted RBP10.38□□□□□ -0.75
CKAP2-202ENST00000378034 SSX9Q7RTT3 188 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 WDR12Q9GZL7 423 aaKnown RBP10.38□□□□□ -0.75
CKAP2-202ENST00000378034 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 FOXA2Q9Y261 457 aaPredicted RBP10.38□□□□□ -0.75
CKAP2-202ENST00000378034 PLXNB1O43157 2135 aa10.38□□□□□ -0.75
CKAP2-202ENST00000378034 UPK2O00526 184 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 ATG12O94817 140 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 PSMB8P28062 276 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
CKAP2-202ENST00000378034 ECSCRQ19T08 205 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 LFNGQ8NES3 379 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
CKAP2-202ENST00000378034 SPIN2AQ99865 258 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 SPIN2BQ9BPZ2 258 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 FAM103A1Q9BTL3 118 aaKnown RBP10.37□□□□□ -0.75
CKAP2-202ENST00000378034 NAA60Q9H7X0 242 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 TEX13DA0A0J9YY54 714 aaPredicted RBP10.37□□□□□ -0.75
CKAP2-202ENST00000378034 CRYM-AS1A6NIL9 109 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 KRASP01116 189 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 HLA-GP17693 338 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 UCP1P25874 307 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 SLC6A1P30531 599 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 DHODHQ02127 395 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 PRR31Q5SQ13 230 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 SGPP2Q8IWX5 399 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 TP53RKQ96S44 253 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 VSIG4Q9Y279 399 aa10.37□□□□□ -0.75
CKAP2-202ENST00000378034 MSGN1A6NI15 193 aa10.36□□□□□ -0.75
CKAP2-202ENST00000378034 RBMS2Q15434 407 aaKnown RBP10.36□□□□□ -0.75
CKAP2-202ENST00000378034 TMEM65Q6PI78 240 aa10.36□□□□□ -0.75
CKAP2-202ENST00000378034 SEC22AQ96IW7 307 aa10.36□□□□□ -0.75
CKAP2-202ENST00000378034 PHB2Q99623 299 aa10.36□□□□□ -0.75
CKAP2-202ENST00000378034 KCNIP3Q9Y2W7 256 aa10.36□□□□□ -0.75
CKAP2-202ENST00000378034 DNHD1Q96M86 4753 aa10.36□□□□□ -0.75
CKAP2-202ENST00000378034 A0A1W2PN81 502 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 ADARB2-AS1A8MUL3 147 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 H3BUA1 57 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 SNAPC5O75971 98 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 BRI3O95415 125 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 G6PCP35575 357 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 CHRNA7P36544 502 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 RPL27AP46776 148 aaKnown RBP10.35□□□□□ -0.75
CKAP2-202ENST00000378034 RPL23AP62750 156 aaKnown RBP10.35□□□□□ -0.75
CKAP2-202ENST00000378034 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 GALNT14Q96FL9 552 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 TMEM222Q9H0R3 208 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 IGKV1-39P01597 117 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 IGKV1D-39P04432 117 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
CKAP2-202ENST00000378034 TRIM16LQ309B1 348 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 KHDC1LQ5JSQ8 128 aa10.35□□□□□ -0.75
CKAP2-202ENST00000378034 THOC7Q6I9Y2 204 aaKnown RBP10.35□□□□□ -0.75
CKAP2-202ENST00000378034 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms