RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 DYNLRB1Q9NP97 96 aa17.77■□□□□ 0.43
RNF39-202ENST00000376751 TNCP24821 2201 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 PRSS46E5RG02 174 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 HMGB3O15347 200 aaKnown RBP17.76■□□□□ 0.43
RNF39-202ENST00000376751 PLAUP00749 431 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 IFNA10P01566 189 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 MYOD1P15172 320 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 MEF2CQ06413 473 aaPredicted RBP17.76■□□□□ 0.43
RNF39-202ENST00000376751 OR10G4Q8NGN3 311 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 CTSZQ9UBR2 303 aa17.76■□□□□ 0.43
RNF39-202ENST00000376751 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.75■□□□□ 0.43
RNF39-202ENST00000376751 FAM90A2PQ658T7 463 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 TMEM200BQ69YZ2 307 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 ABHD12Q8N2K0 398 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 CA5BP1Q8WTZ4 195 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 LHX4Q969G2 390 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 GAL3ST2Q9H3Q3 398 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 TUBA4BQ9H853 241 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 SLC39A9Q9NUM3 307 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 WDR83OSQ9Y284 106 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 ZZEF1O43149 2961 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 FAM90A27PA6NNH2 459 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 GRNP28799 593 aaKnown RBP17.75■□□□□ 0.43
RNF39-202ENST00000376751 HOXA1P49639 335 aaPredicted RBP17.75■□□□□ 0.43
RNF39-202ENST00000376751 OR10G9Q8NGN4 311 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 OR10G7Q8NGN6 311 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 LINC01560Q8TB33 94 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 TMEM14BQ9NUH8 114 aa17.75■□□□□ 0.43
RNF39-202ENST00000376751 FOXA2Q9Y261 457 aaPredicted RBP17.75■□□□□ 0.43
RNF39-202ENST00000376751 ANKHD1Q8IWZ3 2542 aaKnown RBP17.74■□□□□ 0.43
RNF39-202ENST00000376751 VSTM5A8MXK1 200 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 LY86O95711 162 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 DEFA4P12838 97 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 CA7P43166 264 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 RAB11AP62491 216 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 POU2AF1Q16633 256 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 ZNF714Q96N38 554 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 TMPRSS5Q9H3S3 457 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 NBASA2RRP1 2371 aa17.74■□□□□ 0.43
RNF39-202ENST00000376751 CTXND1A0A1B0GTU2 59 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 IGKV1-16P04430 117 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 FOLR2P14207 255 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 CD1BP29016 333 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 UCNP55089 124 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 HEPN1Q6WQI6 88 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 ZFP82Q8N141 532 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 H1FXQ92522 213 aaKnown RBP17.73■□□□□ 0.43
RNF39-202ENST00000376751 CD3EP07766 207 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 ZNF709Q8N972 641 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 OR10A7Q8NGE5 316 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 MRPL20Q9BYC9 149 aaKnown RBP17.73■□□□□ 0.43
RNF39-202ENST00000376751 SLC35D1Q9NTN3 355 aa17.73■□□□□ 0.43
RNF39-202ENST00000376751 SRRM4A7MD48 611 aaKnown RBP17.72■□□□□ 0.43
RNF39-202ENST00000376751 RPP30P78346 268 aaKnown RBP17.72■□□□□ 0.43
RNF39-202ENST00000376751 DLK1P80370 383 aa17.72■□□□□ 0.43
RNF39-202ENST00000376751 ZNF833PQ6ZTB9 187 aa17.72■□□□□ 0.43
RNF39-202ENST00000376751 OR13D1Q8NGV5 346 aa17.72■□□□□ 0.43
RNF39-202ENST00000376751 VAX2Q9UIW0 290 aa17.72■□□□□ 0.43
RNF39-202ENST00000376751 SMCO3A2RU48 225 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 SIAH2O43255 324 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 MBP02144 154 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 IL6RP08887 468 aaPredicted RBP17.71■□□□□ 0.43
RNF39-202ENST00000376751 LOXP28300 417 aaPredicted RBP17.71■□□□□ 0.43
RNF39-202ENST00000376751 HABP2Q14520 560 aaPredicted RBP17.71■□□□□ 0.43
RNF39-202ENST00000376751 EFNB3Q15768 340 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 YPEL4Q96NS1 127 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 NIPSNAP3BQ9BS92 247 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 SAV1Q9H4B6 383 aaPredicted RBP17.71■□□□□ 0.43
RNF39-202ENST00000376751 hCG_1809904A0A1W2PP81 198 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 A0A1W2PR64 198 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 A0A1W2PRV1 198 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 ZNF727A8MUV8 499 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 DVL1O14640 695 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 NDUFB3O43676 98 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 HRASP01112 189 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 MT-ND4LP03901 98 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 APOBEC3AP31941 199 aaPredicted RBP17.71■□□□□ 0.43
RNF39-202ENST00000376751 RAB13P51153 203 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 CASP6P55212 293 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 HSPE1P61604 102 aaKnown RBP17.71■□□□□ 0.43
RNF39-202ENST00000376751 PMS2P11Q13670 270 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 GCSAMLQ5JQS6 135 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 TREML4Q6UXN2 200 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 FAM24BQ8N5W8 94 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 C2CD4CQ8TF44 421 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 RAB24Q969Q5 203 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 TVP23CQ96ET8 276 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 MS4A5Q9H3V2 200 aa17.71■□□□□ 0.43
RNF39-202ENST00000376751 C17orf112F2Z3M2 114 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 TAGLN2P37802 199 aaKnown RBP17.7■□□□□ 0.42
RNF39-202ENST00000376751 CDSNQ15517 529 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 LRRC10Q5BKY1 277 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 GATAD1Q8WUU5 269 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 ACTR3CQ9C0K3 210 aaPredicted RBP17.7■□□□□ 0.42
RNF39-202ENST00000376751 IFNA1P01562 189 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 RTL8BQ17RB0 113 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 SLC35E3Q7Z769 313 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 C1orf159Q96HA4 380 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 OR51B2Q9Y5P1 312 aa17.7■□□□□ 0.42
RNF39-202ENST00000376751 IGHV1-69-2A0A0G2JMI3 117 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms