RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 LFNGQ8NES3 379 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 OR51S1Q8NGJ8 323 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 MARCH1Q8TCQ1 289 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 PRRT1Q99946 306 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 SRRQ9GZT4 340 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 ZNF430Q9H8G1 570 aaPredicted RBP12.53□□□□□ -0.4
HDHD3-202ENST00000374180 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 MCUBQ9NWR8 336 aa12.53□□□□□ -0.4
HDHD3-202ENST00000374180 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.4
HDHD3-202ENST00000374180 ADARB2-AS1A8MUL3 147 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 MPPED1O15442 326 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 S1PR2O95136 353 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 ELANEP08246 267 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 ECI1P42126 302 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 LPAR6P43657 344 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 PIGPP57054 158 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 SSBP2P81877 361 aaPredicted RBP12.52□□□□□ -0.41
HDHD3-202ENST00000374180 TNXAQ16473 311 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 AKIRIN2Q53H80 203 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 TMEM65Q6PI78 240 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 UNQ5815/PRO19632Q6UWF5 114 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 MMD2Q8IY49 270 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 ZFP57Q9NU63 452 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 SCP2D1Q9UJQ7 156 aa12.52□□□□□ -0.41
HDHD3-202ENST00000374180 A0A1W2PN81 502 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 KBTBD11O94819 623 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 TSPAN15O95858 294 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 FAUP35544 74 aaKnown RBP12.51□□□□□ -0.41
HDHD3-202ENST00000374180 CHRNA7P36544 502 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 RND3P61587 244 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
HDHD3-202ENST00000374180 TREML4Q6UXN2 200 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
HDHD3-202ENST00000374180 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 OR13C8Q8NGS7 320 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
HDHD3-202ENST00000374180 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 MRGPRFQ96AM1 343 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 R3HDM4Q96D70 268 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 HRASLSQ9HDD0 168 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 SLC2A8Q9NY64 477 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 COMMD9Q9P000 198 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 COPZ2Q9P299 210 aa12.51□□□□□ -0.41
HDHD3-202ENST00000374180 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
HDHD3-202ENST00000374180 NBEAL1Q6ZS30 2694 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 RPLP1P05386 114 aaKnown RBP12.5□□□□□ -0.41
HDHD3-202ENST00000374180 PSMB8P28062 276 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 DEFA1P59665 94 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 DEFA3P59666 94 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 ERVK-16P61578 105 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 SURF2Q15527 256 aaPredicted RBP12.5□□□□□ -0.41
HDHD3-202ENST00000374180 ZNF585BQ52M93 769 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 C19orf54Q5BKX5 351 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 LCNL1Q6ZST4 164 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 OR4F17Q8NGA8 305 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 OR4F4Q96R69 305 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
HDHD3-202ENST00000374180 BET1LQ9NYM9 111 aa12.5□□□□□ -0.41
HDHD3-202ENST00000374180 C14orf166Q9Y224 244 aaKnown RBP12.5□□□□□ -0.41
HDHD3-202ENST00000374180 KRASP01116 189 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 CTSDP07339 412 aaPredicted RBP12.49□□□□□ -0.41
HDHD3-202ENST00000374180 PF4V1P10720 104 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 RPA2P15927 270 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 INPP1P49441 399 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 RPL23AP62750 156 aaKnown RBP12.49□□□□□ -0.41
HDHD3-202ENST00000374180 POU2AF1Q16633 256 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 ZNF57Q68EA5 555 aaPredicted RBP12.49□□□□□ -0.41
HDHD3-202ENST00000374180 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 OR4A5Q8NH83 315 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
HDHD3-202ENST00000374180 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 PHB2Q99623 299 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 KLK15Q9H2R5 256 aa12.49□□□□□ -0.41
HDHD3-202ENST00000374180 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 NUDT19A8MXV4 375 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 SOX15O60248 233 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 SERPINE2P07093 398 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 MAS1LP35410 378 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 RAB9AP51151 201 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
HDHD3-202ENST00000374180 BAK1Q16611 211 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 OR5T1Q8NG75 326 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 DEDD2Q8WXF8 326 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
HDHD3-202ENST00000374180 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 GPR132Q9UNW8 380 aa12.48□□□□□ -0.41
HDHD3-202ENST00000374180 PTTG1O95997 202 aa12.47□□□□□ -0.41
HDHD3-202ENST00000374180 APELAP0DMC3 54 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms