RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 UCP1P25874 307 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 VDAC2P45880 294 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-203ENST00000372242 GNB1P62873 340 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 CX3CL1P78423 397 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 PUSL1Q8N0Z8 303 aaKnown RBP12.9□□□□□ -0.34
TMEM53-203ENST00000372242 NOL4LQ96MY1 436 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-203ENST00000372242 OR2A7Q96R45 310 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 TMEM222Q9H0R3 208 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 C20orf85Q9H1P6 137 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 ZNF430Q9H8G1 570 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-203ENST00000372242 NUDT15Q9NV35 164 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 RNF114Q9Y508 228 aa12.9□□□□□ -0.34
TMEM53-203ENST00000372242 HAX1O00165 279 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 KBTBD11O94819 623 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 ANXA7P20073 488 aaKnown RBP12.89□□□□□ -0.35
TMEM53-203ENST00000372242 VAMP1P23763 118 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 ERVK-16P61578 105 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
TMEM53-203ENST00000372242 NDPQ00604 133 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 CD300CQ08708 224 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 PPP1R1AQ13522 171 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 AWAT1Q58HT5 328 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 NRARPQ7Z6K4 114 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 SLC25A42Q86VD7 318 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 LHFPL5Q8TAF8 219 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 TMEM140Q9NV12 185 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 KCNIP3Q9Y2W7 256 aa12.89□□□□□ -0.35
TMEM53-203ENST00000372242 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 POU2AF1Q16633 256 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 PRSS8Q16651 343 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 VSTM2AQ8TAG5 236 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 ENKURQ8TC29 256 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 GALNT14Q96FL9 552 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 OR51J1Q9H342 316 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 B3GALNT1O75752 331 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 CDS2O95674 445 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 RAB25P57735 213 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 DHODHQ02127 395 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 TMEM187Q14656 261 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 TMEM167AQ8TBQ9 72 aa12.88□□□□□ -0.35
TMEM53-203ENST00000372242 FAM103A1Q9BTL3 118 aaKnown RBP12.88□□□□□ -0.35
TMEM53-203ENST00000372242 KCNAB3O43448 404 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 CNIH1O95406 144 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 PROK1P58294 105 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 FXYD3Q14802 87 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 TNXAQ16473 311 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 C10orf55Q5SWW7 151 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 GRPEL2Q8TAA5 225 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 ABHD5Q8WTS1 349 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 CASTOR1Q8WTX7 329 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 MMP24Q9Y5R2 645 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 TNCP24821 2201 aa12.87□□□□□ -0.35
TMEM53-203ENST00000372242 IGKV1-5P01602 117 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 IL6RP08887 468 aaPredicted RBP12.86□□□□□ -0.35
TMEM53-203ENST00000372242 OR9G9P0C7N8 305 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 MYOD1P15172 320 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 TMEM268Q5VZI3 342 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 NSG2Q9Y328 171 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 WSB1Q9Y6I7 421 aa12.86□□□□□ -0.35
TMEM53-203ENST00000372242 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 AP4M1O00189 453 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 UPK2O00526 184 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 SFT2D2O95562 160 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 OPN1MWP04001 364 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 H2AFB2P0C5Z0 115 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 OR4E1P0C645 316 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 OPN1MW2P0DN77 364 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 OPN1MW3P0DN78 364 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 ANXA3P12429 323 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 AKR1C2P52895 323 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 ANKRD55Q3KP44 614 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 C4orf46Q504U0 113 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 ZNF695Q8IW36 515 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 SELENOHQ8IZQ5 122 aaKnown RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 STPG2Q8N412 459 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 ARPC1AQ92747 370 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 WNT10AQ9GZT5 417 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 C9orf170A2RU37 121 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 G3V318 75 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 ACTL6BO94805 426 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 COMPP49747 757 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms