RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 hADV38S2A0JD32 116 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 C9JQL5 133 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 SOX15O60248 233 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 NQO2P16083 231 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 PAX6P26367 422 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 NPBWR1P48145 328 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 ARL16Q0P5N6 197 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 LTC4SQ16873 150 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 OR10P1Q8NGE3 313 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
LDB3-204ENST00000372066 FCGR3BO75015 233 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 HSPB1P04792 205 aaKnown RBP11.56□□□□□ -0.56
LDB3-204ENST00000372066 SPCS3P61009 180 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 FLI1Q01543 452 aaPredicted RBP11.56□□□□□ -0.56
LDB3-204ENST00000372066 ZNF506Q5JVG8 444 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 PRAMEF5Q5TYX0 476 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 MBD3L1Q8WWY6 194 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 DDB2Q92466 427 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 TAF15Q92804 592 aaKnown RBP eCLIP11.56□□□□□ -0.56
LDB3-204ENST00000372066 TMEM204Q9BSN7 226 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 GAL3ST2Q9H3Q3 398 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 FBXO7Q9Y3I1 522 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 PLCE1Q9P212 2302 aa11.56□□□□□ -0.56
LDB3-204ENST00000372066 CEBPZOSA8MTT3 80 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 NUPL2O15504 423 aaKnown RBP11.55□□□□□ -0.56
LDB3-204ENST00000372066 PROP1O75360 226 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 RBMXL2O75526 392 aaKnown RBP11.55□□□□□ -0.56
LDB3-204ENST00000372066 TSPAN9O75954 239 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 MBP02144 154 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 GNB2P62879 340 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 RHEBQ15382 184 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 VWC2Q2TAL6 325 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 TMEM41BQ5BJD5 291 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 NCMAPQ5T1S8 102 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 ZNF439Q8NDP4 499 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 OR4C12Q96R67 309 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 CCL13Q99616 98 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 SAP30LQ9HAJ7 183 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 SMCO4Q9NRQ5 59 aa11.55□□□□□ -0.56
LDB3-204ENST00000372066 PMS2P5A8MQ11 134 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 GPR37O15354 613 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 CRLF1O75462 422 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 GYPAP02724 150 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 SELLP14151 372 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 CLEC12BQ2HXU8 276 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 FAM201AQ5SY85 155 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 TCF23Q7RTU1 214 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 ZNF429Q86V71 674 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 MAPK1IP1LQ8NDC0 245 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 OR4A16Q8NH70 328 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 RAB39BQ96DA2 213 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 MS4A5Q9H3V2 200 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
LDB3-204ENST00000372066 UBE2L5PA0A1B0GUS4 154 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 H7C2Y5 167 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 NDUFA2O43678 99 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 NDUFS6O75380 124 aaKnown RBP11.54□□□□□ -0.56
LDB3-204ENST00000372066 F12P00748 615 aaPredicted RBP11.54□□□□□ -0.56
LDB3-204ENST00000372066 ARG1P05089 322 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 DAOP14920 347 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 ZNF134P52741 427 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 CCL8P80075 99 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 EFNB3Q15768 340 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 POU2AF1Q16633 256 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 SOHLH1Q5JUK2 328 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 OR8G2PQ6IF36 304 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 FAM216BQ8N7L0 139 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 TUBA4BQ9H853 241 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 RFNGQ9Y644 331 aa11.54□□□□□ -0.56
LDB3-204ENST00000372066 PPIAL4EA0A075B759 164 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 C17orf112F2Z3M2 114 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 PPIAL4DF5H284 164 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 TMEM178BH3BS89 294 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 HRASP01112 189 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 IFNA1P01562 189 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 CD3EP07766 207 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
LDB3-204ENST00000372066 PPIAL4FP0DN26 164 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 MRPS11P82912 194 aaKnown RBP11.53□□□□□ -0.56
LDB3-204ENST00000372066 HFEQ30201 348 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 RPL39P5Q59GN2 51 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 ADAM5Q6NVV9 412 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
LDB3-204ENST00000372066 DEFB108BQ8NET1 73 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 CLDND2Q8NHS1 167 aa11.53□□□□□ -0.56
LDB3-204ENST00000372066 ZNF251Q9BRH9 671 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms