RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
SS18L1-202ENST00000370848 MS4A10Q96PG2 267 aa11.76□□□□□ -0.53
SS18L1-202ENST00000370848 OR5B12Q96R08 314 aa11.76□□□□□ -0.53
SS18L1-202ENST00000370848 SOSTQ9BQB4 213 aa11.76□□□□□ -0.53
SS18L1-202ENST00000370848 ZNF701M0R085 212 aaPredicted RBP11.75□□□□□ -0.53
SS18L1-202ENST00000370848 CTDSPLO15194 276 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 CD74P04233 296 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 PI3P19957 117 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 CDX1P47902 265 aaPredicted RBP11.75□□□□□ -0.53
SS18L1-202ENST00000370848 RAB9AP51151 201 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 PPP5CP53041 499 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 TAS2R19P59542 299 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 FHL3Q13643 280 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 AKIRIN2Q53H80 203 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 TMEM65Q6PI78 240 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 LHFPL1Q86WI0 220 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 ZNF491Q8N8L2 437 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 OR5T1Q8NG75 326 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 SRSF12Q8WXF0 261 aaKnown RBP11.75□□□□□ -0.53
SS18L1-202ENST00000370848 RHOVQ96L33 236 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 RSRP1Q9BUV0 290 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 ALX4Q9H161 411 aaPredicted RBP11.75□□□□□ -0.53
SS18L1-202ENST00000370848 DNAH7Q8WXX0 4024 aa11.75□□□□□ -0.53
SS18L1-202ENST00000370848 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 DPPA5A6NC42 116 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 FABP12A6NFH5 140 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 MSGN1A6NI15 193 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 RBFOX2O43251 390 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■■■□ 22.4
SS18L1-202ENST00000370848 KBTBD11O94819 623 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 OR2A4O95047 310 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 RAB3DO95716 219 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 IFNA6P05013 189 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 MRPS10P82664 201 aaKnown RBP11.74□□□□□ -0.53
SS18L1-202ENST00000370848 TMEM267Q0VDI3 215 aaPredicted RBP11.74□□□□□ -0.53
SS18L1-202ENST00000370848 OR4A47Q6IF82 309 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 STEAP1BQ6NZ63 245 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 TCTEX1D1Q8N7M0 179 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 TMEM167AQ8TBQ9 72 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 OR2A7Q96R45 310 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 LSM4Q9Y4Z0 139 aaKnown RBP11.74□□□□□ -0.53
SS18L1-202ENST00000370848 V9GYH0 126 aa11.74□□□□□ -0.53
SS18L1-202ENST00000370848 HUWE1Q7Z6Z7 4374 aaKnown RBP11.73□□□□□ -0.53
SS18L1-202ENST00000370848 A0A1B0GW64 132 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 E7EUB6 86 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 CCL24O00175 119 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 GSTZ1O43708 216 aaPredicted RBP11.73□□□□□ -0.53
SS18L1-202ENST00000370848 HPRT1P00492 218 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
SS18L1-202ENST00000370848 PGAM2P15259 253 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 TBPP20226 339 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 UCP3P55916 312 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 CD69Q07108 199 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 SCGB2B2Q4G0G5 96 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 DEFB121Q5J5C9 76 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 C19orf35Q6ZS72 473 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 CMTM1Q8IZ96 169 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 SLC38A6Q8IZM9 456 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 OR4C16Q8NGL9 310 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 C4orf3Q8WVX3 66 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 BORCS5Q969J3 196 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 PHB2Q99623 299 aa11.73□□□□□ -0.53
SS18L1-202ENST00000370848 HMX3A6NHT5 357 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 I3L521 148 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 HRASP01112 189 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 IGHV3-11P01762 117 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 F2RP25116 425 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 LPAR6P43657 344 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 TPPP2P59282 170 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 TAS2R31P59538 309 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 SSBP1Q04837 148 aaKnown RBP11.72□□□□□ -0.53
SS18L1-202ENST00000370848 ARRDC1Q8N5I2 433 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 POC5Q8NA72 575 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
SS18L1-202ENST00000370848 UBE2E2Q96LR5 201 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 SLC2A9Q9NRM0 540 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 VSIG4Q9Y279 399 aa11.72□□□□□ -0.53
SS18L1-202ENST00000370848 TEX22C9J3V5 150 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.53
SS18L1-202ENST00000370848 PRH1P02810 166 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 TRGV3P03979 118 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.53
SS18L1-202ENST00000370848 NQO2P16083 231 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 RAB25P57735 213 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 ZNF79Q15937 498 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 LPCAT3Q6P1A2 487 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 CCDC190Q86UF4 302 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 VSTM2AQ8TAG5 236 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 PLEKHA2Q9HB19 425 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 HRASLSQ9HDD0 168 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms