RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 OR4A47Q6IF82 309 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 MMD2Q8IY49 270 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 VKORC1L1Q8N0U8 176 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 TMEM167AQ8TBQ9 72 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 MDFIQ99750 246 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 WNT10AQ9GZT5 417 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 TPSG1Q9NRR2 321 aa12.28□□□□□ -0.44
PRPF38B-202ENST00000370022 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 FCN1O00602 326 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 CDS2O95674 445 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 KRASP01116 189 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 MAS1LP35410 378 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 SP6Q3SY56 376 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 SSX9Q7RTT3 188 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 SLC25A42Q86VD7 318 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 GLYATL2Q8WU03 294 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 CHPT1Q8WUD6 406 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 CLCC1Q96S66 551 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 TMEM140Q9NV12 185 aa12.27□□□□□ -0.44
PRPF38B-202ENST00000370022 ACTL6BO94805 426 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 TCRBP04435 133 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 IL6RP08887 468 aaPredicted RBP12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 SRPXP78539 464 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 C12orf54Q6X4T0 127 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 ZNF430Q9H8G1 570 aaPredicted RBP12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 PALMDQ9NP74 551 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 CNIH1O95406 144 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 G6PCP35575 357 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 CRIP2P52943 208 aaPredicted RBP12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 RPL8P62917 257 aaKnown RBP12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 SUPT4H1P63272 117 aaKnown RBP12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 FXYD3Q14802 87 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 MRGPRG-AS1Q2M3A8 158 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 STPG2Q8N412 459 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 ENKURQ8TC29 256 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 IL22RA2Q969J5 263 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM56Q96MV1 263 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 ALX4Q9H161 411 aaPredicted RBP12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 PARP11Q9NR21 331 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM56-RWDD3S4R434 201 aa12.26□□□□□ -0.45
PRPF38B-202ENST00000370022 LINC01548A6NM66 108 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 HAX1O00165 279 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 UPK2O00526 184 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 ARPC1BO15143 372 aaKnown RBP12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 ATP6V0E1O15342 81 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 VDAC1P21796 283 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 VAMP1P23763 118 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 GNB1P62873 340 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 SLC35B1P78383 322 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 PJVKQ0ZLH3 352 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM187Q14656 261 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 Q6ZNX1 250 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 CENPVQ7Z7K6 275 aaPredicted RBP12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 ZNF695Q8IW36 515 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 WFDC12Q8WWY7 111 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 FLVCR2Q9UPI3 526 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 NUBP2Q9Y5Y2 271 aa12.25□□□□□ -0.45
PRPF38B-202ENST00000370022 SNAPC5O75971 98 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 SFT2D2O95562 160 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 HLA-GP17693 338 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 AKR1C2P52895 323 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 NDPQ00604 133 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 TNXAQ16473 311 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 NDUFA5Q16718 116 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 FAM219AQ8IW50 185 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 DUSP18Q8NEJ0 188 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 RRNAD1Q96FB5 475 aaKnown RBP12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 TMEM68Q96MH6 324 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 NUDT15Q9NV35 164 aa12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 FBN1P35555 2871 aaKnown RBP12.24□□□□□ -0.45
PRPF38B-202ENST00000370022 PSMB11A5LHX3 300 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 OR4E1P0C645 316 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 SSBP2P81877 361 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 PPP1R1AQ13522 171 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 AKIRIN2Q53H80 203 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 LGI3Q8N145 548 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 WIPF2Q8TF74 440 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 ABHD5Q8WTS1 349 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 NOL4LQ96MY1 436 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 ZNF747Q9BV97 191 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 FKBP11Q9NYL4 201 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
PRPF38B-202ENST00000370022 TRAV41A0A0B4J266 112 aa12.22□□□□□ -0.45
PRPF38B-202ENST00000370022 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms