RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 FAM90A1Q86YD7 464 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 MRPL13Q9BYD1 178 aaKnown RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 DICER1Q9UPY3 1922 aaKnown RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 A6NDN8 102 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 RPL27AP46776 148 aaKnown RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 RPL8P62917 257 aaKnown RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 PMCHL1Q16048 86 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 SPSB4Q96A44 273 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 PGPEP1Q9NXJ5 209 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 RAXQ9Y2V3 346 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 AHCTF1Q8WYP5 2266 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 ATP5G2Q06055 141 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 FAM74A4Q5TZK3 123 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 PCSK4Q6UW60 755 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 NDUFB4O95168 129 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TRGC2P03986 189 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 AMY1AP04745 511 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 CIRBPQ14011 172 aaKnown RBP7.68□□□□□ -1.18
SYNE1-205ENST00000367251 SRSF7Q16629 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNE1-205ENST00000367251 MRPL54Q6P161 138 aaKnown RBP7.68□□□□□ -1.18
SYNE1-205ENST00000367251 NR2C2APQ86WQ0 139 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 KLF14Q8TD94 323 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-205ENST00000367251 VWCEQ96DN2 955 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 CCL13Q99616 98 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 DMRT1Q9Y5R6 373 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TRGV2A0A075B6R0 118 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TRAV30A0A087WSZ9 112 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 A0A1W2PPE3 182 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 RNF222A6NCQ9 220 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 MARCH11A6NNE9 402 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 F8VVB4 439 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 F8VWA3 439 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TCL1AP56279 114 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
SYNE1-205ENST00000367251 IL36RNQ9UBH0 155 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 PLXNA3P51805 1871 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TRAV9-1A0A075B6T8 112 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 LOC102723996A0A087X1L8 192 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TRAV14DV4A0A0A6YYC5 116 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 NPIPB7O75200 414 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 EGR1P18146 543 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 FAM89BQ8N5H3 189 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TMEM186Q96B77 213 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TMEM101Q96IK0 257 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TP53RKQ96S44 253 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 TMEM74BQ9NUR3 256 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 SCN3AQ9NY46 2000 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 LOC105371242A0A075B767 164 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 CLDN18P56856 261 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 NSUN5P1Q3KNT7 163 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 IBA57Q5T440 356 aaKnown RBP7.68□□□□□ -1.18
SYNE1-205ENST00000367251 FAM168AQ92567 244 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 NINQ8N4C6 2090 aa7.68□□□□□ -1.18
SYNE1-205ENST00000367251 RPS20P60866 119 aaKnown RBP7.67□□□□□ -1.18
SYNE1-205ENST00000367251 LCN2P80188 198 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ABLIM2Q6H8Q1 611 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 RHOVQ96L33 236 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF703Q9H7S9 590 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-205ENST00000367251 PHLDA3Q9Y5J5 127 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 CASP8AP2Q9UKL3 1982 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 LOC101059948A0A1B0GTJ6 334 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C1QL1O75973 258 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C8orf88P0DMB2 117 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 TGIF1Q15583 401 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 MRPL14Q6P1L8 145 aaKnown RBP7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C12orf54Q6X4T0 127 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 DRAM1Q8N682 238 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 LINC01560Q8TB33 94 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 MS4A3Q96HJ5 214 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 FOXC2Q99958 501 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 GDF15Q99988 308 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ELOVL5Q9NYP7 299 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ABCA1O95477 2261 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 CDK2AP2O75956 126 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 S1PR2O95136 353 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 Q6ZT83 130 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C18orf12Q96KH6 178 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 RARRES2Q99969 163 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 A6NJY4 79 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ACAA1P09110 424 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-205ENST00000367251 AGAP20933 346 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 FOXL2P58012 376 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF56Q15929 161 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C2orf68Q2NKX9 166 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ITLN1Q8WWA0 313 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 IMMP1LQ96LU5 166 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 QTRT1Q9BXR0 403 aaKnown RBP7.67□□□□□ -1.18
SYNE1-205ENST00000367251 H0YL77 283 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ZIC3O60481 467 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 LTBRP36941 435 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 COL5A1-AS1Q5SY13 56 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C11orf44Q8N8P7 122 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 TBX15Q96SF7 602 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 NEU1Q99519 415 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 C7orf69Q9H7B7 122 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 ZFP30Q9Y2G7 519 aa7.67□□□□□ -1.18
SYNE1-205ENST00000367251 SPAG17Q6Q759 2223 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms