RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TXN2Q99757 166 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 STRADBQ9C0K7 418 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 KCNIP2Q9NS61 270 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 ELOVL5Q9NYP7 299 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 ABCA1O95477 2261 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 SMPD2O60906 423 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 IRF2P14316 349 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 CDKN1AP38936 164 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 HLA-DRB5Q30154 266 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 ACSF3Q4G176 576 aaPredicted RBP6.83□□□□□ -1.32
CD46-208ENST00000367042 COA6Q5JTJ3 125 aaKnown RBP6.83□□□□□ -1.32
CD46-208ENST00000367042 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 SPATA31B1PQ5VZV4 182 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 TMEM106BQ9NUM4 274 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 GOLT1BQ9Y3E0 138 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 CNOT1A5YKK6 2376 aaKnown RBP6.83□□□□□ -1.32
CD46-208ENST00000367042 IGHV3OR15-7A0A075B7D8 119 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 CXorf1O96002 111 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 RAB31Q13636 194 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 DOLPP1Q86YN1 238 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 ZBTB34Q8NCN2 500 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 KLF14Q8TD94 323 aaPredicted RBP6.83□□□□□ -1.32
CD46-208ENST00000367042 FAM216AQ8WUB2 273 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 FAM122AQ96E09 287 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 S1PR3Q99500 378 aa6.83□□□□□ -1.32
CD46-208ENST00000367042 HSD17B10Q99714 261 aaKnown RBP6.83□□□□□ -1.32
CD46-208ENST00000367042 MBNL3Q9NUK0 354 aaKnown RBP6.83□□□□□ -1.32
CD46-208ENST00000367042 TNCP24821 2201 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TRBV20OR9-2A0A075B6H5 130 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TRAV3A0A0B4J244 114 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 F2Z2F3 143 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 KLRC4-KLRK1H3BQV0 150 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 NTN3O00634 580 aaPredicted RBP6.82□□□□□ -1.32
CD46-208ENST00000367042 MT-CO2P00403 227 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 OR10J4P0C629 311 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TNFSF10P50591 281 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TDGF1P3P51864 188 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 PSG5Q15238 335 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 ATP1A1-AS1Q5TC04 95 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 NHLRC2Q8NBF2 726 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 LRRC29Q8WV35 223 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 NEU1Q99519 415 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 SEPSECSQ9HD40 501 aaKnown RBP6.82□□□□□ -1.32
CD46-208ENST00000367042 FOXH1O75593 365 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 CGAP01215 116 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TIMP3P35625 211 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 PDLIM4P50479 330 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 ZNF146Q15072 292 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 RPEL1Q2QD12 228 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 DCAF10Q5QP82 559 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 ASPHD1Q5U4P2 390 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 OR2Z1Q8NG97 314 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 COQ2Q96H96 371 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TRIB1Q96RU8 372 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 ZNF586Q9NXT0 402 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 WDR83OSQ9Y284 106 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 WIPI2Q9Y4P8 454 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TIMM8BQ9Y5J9 83 aaPredicted RBP6.82□□□□□ -1.32
CD46-208ENST00000367042 ARFGEF3Q5TH69 2177 aa6.82□□□□□ -1.32
CD46-208ENST00000367042 TRGV5A0A0B4J1U4 118 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 PMS2P5A8MQ11 134 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 ZNF253O75346 499 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 GATA2P23769 480 aaPredicted RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 GNG4P50150 75 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 RPL15P61313 204 aaKnown RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 FOXF2Q12947 444 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 SMIM21Q3B7S5 101 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 Q6ZR03 302 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 Q6ZWC4 215 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 MMD2Q8IY49 270 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 BCL2L2Q92843 193 aaPredicted RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 PARD6GQ9BYG4 376 aaPredicted RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 FOXJ2Q9P0K8 574 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 PPIAL4AQ9Y536 164 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 YTHDF2Q9Y5A9 579 aaKnown RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 EP300Q09472 2414 aaPredicted RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 TYMSP04818 313 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 CD46P15529 392 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 CRYBB3P26998 211 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 RANP62826 216 aaKnown RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 SUMO1P63165 101 aaKnown RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 RPL19P84098 196 aaKnown RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 KRTCAP3Q53RY4 240 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 PQLC2Q6ZP29 291 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 DEFB108BQ8NET1 73 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 MGST2Q99735 147 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 RNASE7Q9H1E1 156 aaKnown RBP6.81□□□□□ -1.32
CD46-208ENST00000367042 LOC400499M0QZD8 3231 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 NPSP0C0P6 89 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 MYOD1P15172 320 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 GCHFRP30047 84 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 GNG10P50151 68 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms