RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 PRH1P02810 166 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 RAB13P51153 203 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 Q6ZRG5 221 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
NEK2-201ENST00000366998 Q8N7P7 452 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 OR4C13Q8NGP0 309 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 SCGB1C1Q8TD33 95 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
NEK2-201ENST00000366998 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 BPESC1Q9GZL8 116 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 PRNDQ9UKY0 176 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
NEK2-201ENST00000366998 BUB1B-PAK6H3BSN5 160 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 M0R1W7 72 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 UPK2O00526 184 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 ENSAO43768 121 aaKnown RBP12.14□□□□□ -0.47
NEK2-201ENST00000366998 LY86O95711 162 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 IFNA10P01566 189 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 CAMLGP49069 296 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 PDLIM4P50479 330 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 HRH4Q9H3N8 390 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 IGHV3-72A0A0B4J1Y9 119 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 UBE2L5PA0A1B0GUS4 154 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 FGF2P09038 288 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 MYOD1P15172 320 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 MC5RP33032 325 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
NEK2-201ENST00000366998 RPP30P78346 268 aaKnown RBP12.14□□□□□ -0.47
NEK2-201ENST00000366998 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
NEK2-201ENST00000366998 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 MARC2Q969Z3 335 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
NEK2-201ENST00000366998 BET1LQ9NYM9 111 aa12.14□□□□□ -0.47
NEK2-201ENST00000366998 TACC2O95359 2948 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 C15orf62A8K5M9 175 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 KBTBD11O94819 623 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 ARG1P05089 322 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
NEK2-201ENST00000366998 VDAC2P45880 294 aaPredicted RBP12.13□□□□□ -0.47
NEK2-201ENST00000366998 RAB5CP51148 216 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 LCN2P80188 198 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 ZNF616Q08AN1 781 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 KLRD1Q13241 179 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 IGFBPL1Q8WX77 278 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 RPEQ96AT9 228 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 PINX1Q96BK5 328 aaKnown RBP12.13□□□□□ -0.47
NEK2-201ENST00000366998 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 MMP26Q9NRE1 261 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 INSIG2Q9Y5U4 225 aa12.13□□□□□ -0.47
NEK2-201ENST00000366998 A1L4Q6 167 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 OPN1MWP04001 364 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
NEK2-201ENST00000366998 OPN1MW2P0DN77 364 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 OPN1MW3P0DN78 364 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 PUSL1Q8N0Z8 303 aaKnown RBP12.12□□□□□ -0.47
NEK2-201ENST00000366998 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 IGHV1-3A0A0C4DH29 117 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 PMS2P5A8MQ11 134 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 COX6B1P14854 86 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 FHITP49789 147 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 SRSF1Q07955 248 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEK2-201ENST00000366998 EIF4E3Q8N5X7 224 aaKnown RBP12.12□□□□□ -0.47
NEK2-201ENST00000366998 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 TMEM147Q9BVK8 224 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 FKBP11Q9NYL4 201 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
NEK2-201ENST00000366998 TNCP24821 2201 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 A8MXK9 166 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 TRIM77I1YAP6 450 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 PRTN3P24158 256 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 F2RL1P55085 397 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 LRRC75BQ2VPJ9 315 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 AKR1C8PQ5T2L2 129 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 KIR3DL3Q8N743 410 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
NEK2-201ENST00000366998 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 UQCC1Q9NVA1 299 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 ZNF257Q9Y2Q1 563 aa12.11□□□□□ -0.47
NEK2-201ENST00000366998 UTP20O75691 2785 aaKnown RBP12.11□□□□□ -0.47
NEK2-201ENST00000366998 UBR5O95071 2799 aaPredicted RBP12.11□□□□□ -0.47
NEK2-201ENST00000366998 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
NEK2-201ENST00000366998 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
NEK2-201ENST00000366998 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
NEK2-201ENST00000366998 UMAD1C9J7I0 102 aa12.1□□□□□ -0.47
NEK2-201ENST00000366998 SCAF4O95104 1147 aaKnown RBP12.1□□□□□ -0.47
NEK2-201ENST00000366998 USF1P22415 310 aaPredicted RBP12.1□□□□□ -0.47
NEK2-201ENST00000366998 HTR1DP28221 377 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms