RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MRPL32Q9BYC8 188 aaKnown RBP7.56□□□□□ -1.2
COL6A6-201ENST00000358511 DENND4CQ5VZ89 1909 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1W2PP11 408 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 PATE4P0C8F1 98 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 SFTPCP11686 197 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 ZP4Q12836 540 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 WIPI1Q5MNZ9 446 aaPredicted RBP7.55□□□□□ -1.2
COL6A6-201ENST00000358511 WNT16Q9UBV4 365 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TSPAN2O60636 221 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 GABRG2P18507 467 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 LGALS7P47929 136 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 SMAGPQ0VAQ4 97 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 FGFRL1Q8N441 504 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 GPBAR1Q8TDU6 330 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 SDF2L1Q9HCN8 221 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 A6NNC1 897 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 HEXA-AS1Q9H8Q6 139 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 ERGP11308 486 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
COL6A6-201ENST00000358511 GPR183P32249 361 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TM4SF4P48230 202 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 SEC11AP67812 179 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 FAM27BQ5VT28 67 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TCF23Q7RTU1 214 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 WFDC6Q9BQY6 131 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 MRPS16Q9Y3D3 137 aaKnown RBP7.55□□□□□ -1.2
COL6A6-201ENST00000358511 OR11H12B2RN74 326 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 NGFRP08138 427 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 CTSSP25774 331 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 OR11H1Q8NG94 326 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 OR11H2Q8NH07 326 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 CLEC1BQ9P126 229 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 SIT1Q9Y3P8 196 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM262E9PQX1 116 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 IFI6P09912 130 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 CRYBB3P26998 211 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 GPX4P36969 197 aaPredicted RBP7.55□□□□□ -1.2
COL6A6-201ENST00000358511 TNFAIP6P98066 277 aaPredicted RBP7.55□□□□□ -1.2
COL6A6-201ENST00000358511 MMDQ15546 238 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF818PQ6ZRF7 136 aa7.55□□□□□ -1.2
COL6A6-201ENST00000358511 PPIAL4DF5H284 164 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 HIST1H1AQ02539 215 aaPredicted RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 RELQ04864 619 aaPredicted RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 C2orf83Q53S99 150 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 SCNM1Q9BWG6 230 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 K7N7A8 449 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 TNCP24821 2201 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 RIF1Q5UIP0 2472 aaKnown RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 TNFSF13O75888 250 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 PPP1R17O96001 155 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 GFI1BQ5VTD9 330 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 SERGEFQ9UGK8 458 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV1D-16P01601 117 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 CIRBPQ14011 172 aaKnown RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 GFRALQ6UXV0 394 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 TRGV5A0A0B4J1U4 118 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 AMBPP02760 352 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 FAM19A2Q8N3H0 131 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 SFXN3Q9BWM7 321 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 FOXD3Q9UJU5 478 aaPredicted RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 TNS1Q9HBL0 1735 aaKnown RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV3D-15A0A087WSY6 115 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 APOMO95445 188 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 DNAL4O96015 105 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV3-15P01624 115 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 ASCL5Q7RTU5 278 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 ANKRD33Q7Z3H0 272 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 ST6GALNAC6Q969X2 333 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 C8orf88P0DMB2 117 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 LY6G6FQ5SQ64 297 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
COL6A6-201ENST00000358511 G6PC2Q9NQR9 355 aa7.54□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM14DPA8MWL7 114 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 H3BUT2 72 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM50AO95807 157 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 OR10J3Q5JRS4 329 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 WDR54Q9H977 334 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 NDUFA2O43678 99 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 IGHMP01871 453 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 OR4X2Q8NGF9 303 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 PGPEP1LA6NFU8 196 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 ID1P41134 155 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF83P51522 516 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 LRRC75BQ2VPJ9 315 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 LHX8Q68G74 356 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 C9orf40Q8IXQ3 194 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 RND1Q92730 232 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 RASL10BQ96S79 203 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 DMRTA2Q96SC8 542 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 GNB1LQ9BYB4 327 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF257Q9Y2Q1 563 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1B0GW15 77 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 DLL1O00548 723 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 GCHFRP30047 84 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 KCNMB1Q16558 191 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms