RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PUSL1Q8N0Z8 303 aaKnown RBP11.79□□□□□ -0.52
CCNE1-202ENST00000357943 DMBX1Q8NFW5 382 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 SEC22AQ96IW7 307 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 TMEM56Q96MV1 263 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 NPFFR1Q9GZQ6 430 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 TMEM56-RWDD3S4R434 201 aa11.79□□□□□ -0.52
CCNE1-202ENST00000357943 OR2A4O95047 310 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 CRYBA1P05813 215 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 TRAPPC2P0DI81 140 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 TRAPPC2BP0DI82 140 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 C9orf152Q5JTZ5 239 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 TMEM268Q5VZI3 342 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 OR4A47Q6IF82 309 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 LIN54Q6MZP7 749 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 Q6ZSV7 163 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 LYG2Q86SG7 212 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 ZNF695Q8IW36 515 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
CCNE1-202ENST00000357943 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
CCNE1-202ENST00000357943 OR2A7Q96R45 310 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 KBTBD11O94819 623 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 ERVK-16P61578 105 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 VSTM2AQ8TAG5 236 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 SEC22CQ9BRL7 303 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 AIFM2Q9BRQ8 373 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 OR51J1Q9H342 316 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 ZNF702PQ9H963 129 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 BET1LQ9NYM9 111 aa11.78□□□□□ -0.52
CCNE1-202ENST00000357943 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 LINC01548A6NM66 108 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 CA2P00918 260 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 HLA-DRB1P01911 266 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 IL6RP08887 468 aaPredicted RBP11.77□□□□□ -0.53
CCNE1-202ENST00000357943 EIF2B2P49770 351 aaKnown RBP11.77□□□□□ -0.53
CCNE1-202ENST00000357943 AKR1C2P52895 323 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 RRAS2P62070 204 aaPredicted RBP11.77□□□□□ -0.53
CCNE1-202ENST00000357943 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 SLC35G3Q8N808 338 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 PRSS22Q9GZN4 317 aa11.77□□□□□ -0.53
CCNE1-202ENST00000357943 ZNF430Q9H8G1 570 aaPredicted RBP11.77□□□□□ -0.53
CCNE1-202ENST00000357943 IGHV7-81A0A0B4J1V7 117 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 TSPAN9O75954 239 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
CCNE1-202ENST00000357943 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 S100A1P23297 94 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 CX3CL1P78423 397 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
CCNE1-202ENST00000357943 CD300CQ08708 224 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 PRSS8Q16651 343 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 TMEM95Q3KNT9 176 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 LYZL2Q7Z4W2 148 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 LGI3Q8N145 548 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.76□□□□□ -0.53
CCNE1-202ENST00000357943 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 RANBP3Q9H6Z4 567 aaPredicted RBP11.76□□□□□ -0.53
CCNE1-202ENST00000357943 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 ATRQ13535 2644 aa11.76□□□□□ -0.53
CCNE1-202ENST00000357943 SNRPGP15A8MWD9 76 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 IGHG2P01859 326 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 GNB1P62873 340 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 SRPXP78539 464 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 NDPQ00604 133 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 H2BFWTQ7Z2G1 175 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 Q8N2B8 174 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 LRTM2Q8N967 370 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 MITD1Q8WV92 249 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 GPN1Q9HCN4 374 aaPredicted RBP11.75□□□□□ -0.53
CCNE1-202ENST00000357943 A0A0B4J2A0 478 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 UPK2O00526 184 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 CCNKO75909 580 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 ATG12O94817 140 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 P0C879 139 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 MYOD1P15172 320 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 ZNF562Q6V9R5 426 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 OR4A5Q8NH83 315 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 RNASE11Q8TAA1 199 aaKnown RBP11.75□□□□□ -0.53
CCNE1-202ENST00000357943 ZNF431Q8TF32 576 aaPredicted RBP11.75□□□□□ -0.53
CCNE1-202ENST00000357943 RRNAD1Q96FB5 475 aaKnown RBP11.75□□□□□ -0.53
CCNE1-202ENST00000357943 MED28Q9H204 178 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 SHPKQ9UHJ6 478 aa11.75□□□□□ -0.53
CCNE1-202ENST00000357943 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 CREBL2O60519 120 aaPredicted RBP11.74□□□□□ -0.53
CCNE1-202ENST00000357943 HOXB5P09067 269 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 HKR1P10072 659 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 OR2B8PP59922 312 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
CCNE1-202ENST00000357943 TNXAQ16473 311 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 C10orf55Q5SWW7 151 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 Q6ZRM9 215 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms