RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 GPR6P46095 362 aaPredicted RBP20.87■□□□□ 0.93
CLK2-201ENST00000355560 LY6G5BQ8NDX9 201 aa20.87■□□□□ 0.93
CLK2-201ENST00000355560 RSG1Q9BU20 258 aa20.87■□□□□ 0.93
CLK2-201ENST00000355560 SSBP3Q9BWW4 388 aaPredicted RBP20.87■□□□□ 0.93
CLK2-201ENST00000355560 HIPK2Q9H2X6 1198 aa20.87■□□□□ 0.93
CLK2-201ENST00000355560 C15orf62A8K5M9 175 aa20.87■□□□□ 0.93
CLK2-201ENST00000355560 HOXA1P49639 335 aaPredicted RBP20.87■□□□□ 0.93
CLK2-201ENST00000355560 SRSF3P84103 164 aaKnown RBP20.87■□□□□ 0.93
CLK2-201ENST00000355560 LRRC75BQ2VPJ9 315 aa20.87■□□□□ 0.93
CLK2-201ENST00000355560 PINX1Q96BK5 328 aaKnown RBP20.87■□□□□ 0.93
CLK2-201ENST00000355560 HEYLQ9NQ87 328 aaPredicted RBP20.87■□□□□ 0.93
CLK2-201ENST00000355560 COL12A1Q99715 3063 aa20.87■□□□□ 0.93
CLK2-201ENST00000355560 hCG_1809904A0A1W2PP81 198 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 A0A1W2PPE2 198 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 A0A1W2PR64 198 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 A0A1W2PRV1 198 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 SAA1P0DJI8 122 aaPredicted RBP20.86■□□□□ 0.93
CLK2-201ENST00000355560 VDAC2P45880 294 aaPredicted RBP20.86■□□□□ 0.93
CLK2-201ENST00000355560 EFNA4P52798 201 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 AIFM2Q9BRQ8 373 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 CLEC7AQ9BXN2 247 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 WDR61Q9GZS3 305 aaKnown RBP20.86■□□□□ 0.93
CLK2-201ENST00000355560 FBXO7Q9Y3I1 522 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 DOPEY1Q5JWR5 2465 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 TSPAN15O95858 294 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 IGLV1-47P01700 117 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 IL6RP08887 468 aaPredicted RBP20.86■□□□□ 0.93
CLK2-201ENST00000355560 HLA-DRB5Q30154 266 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 PDPNQ86YL7 162 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 FLYWCH2Q96CP2 140 aaKnown RBP20.86■□□□□ 0.93
CLK2-201ENST00000355560 PRNDQ9UKY0 176 aa20.86■□□□□ 0.93
CLK2-201ENST00000355560 AKAP6Q13023 2319 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 IFNA10P01566 189 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 PRRX1P54821 245 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 HSPE1P61604 102 aaKnown RBP20.85■□□□□ 0.93
CLK2-201ENST00000355560 TMEM177Q53S58 311 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 AKR1C8PQ5T2L2 129 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 OR4C13Q8NGP0 309 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 LHX4Q969G2 390 aa20.85■□□□□ 0.93
CLK2-201ENST00000355560 UPK2O00526 184 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 RNF224P0DH78 156 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 COX7A1P24310 79 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 RPP30P78346 268 aaKnown RBP20.84■□□□□ 0.93
CLK2-201ENST00000355560 ATP6V1FQ16864 119 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 PCGF1Q9BSM1 259 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 TMEM147Q9BVK8 224 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 PARD6GQ9BYG4 376 aaPredicted RBP20.84■□□□□ 0.93
CLK2-201ENST00000355560 TMEM231Q9H6L2 316 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 BET1LQ9NYM9 111 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 WASHC3Q9Y3C0 194 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 OR51B2Q9Y5P1 312 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 MYOD1P15172 320 aa20.84■□□□□ 0.93
CLK2-201ENST00000355560 ARHGAP32A7KAX9 2087 aa20.83■□□□□ 0.93
CLK2-201ENST00000355560 FLNCQ14315 2725 aa20.83■□□□□ 0.93
CLK2-201ENST00000355560 RAB13P51153 203 aa20.83■□□□□ 0.93
CLK2-201ENST00000355560 UQCC1Q9NVA1 299 aa20.83■□□□□ 0.93
CLK2-201ENST00000355560 TNCP24821 2201 aa20.83■□□□□ 0.92
CLK2-201ENST00000355560 OR8U8P0C7N1 319 aa20.83■□□□□ 0.92
CLK2-201ENST00000355560 BEND2Q8NDZ0 799 aa20.83■□□□□ 0.92
CLK2-201ENST00000355560 TAF15Q92804 592 aaKnown RBP eCLIP20.83■□□□□ 0.92
CLK2-201ENST00000355560 PSMG3Q9BT73 122 aaPredicted RBP20.83■□□□□ 0.92
CLK2-201ENST00000355560 FAM96BQ9Y3D0 163 aa20.83■□□□□ 0.92
CLK2-201ENST00000355560 LOC105371242A0A075B767 164 aa20.82■□□□□ 0.92
CLK2-201ENST00000355560 PUSL1Q8N0Z8 303 aaKnown RBP20.82■□□□□ 0.92
CLK2-201ENST00000355560 TREM1Q9NP99 234 aa20.82■□□□□ 0.92
CLK2-201ENST00000355560 ZNF257Q9Y2Q1 563 aa20.82■□□□□ 0.92
CLK2-201ENST00000355560 USP9XQ93008 2570 aaPredicted RBP20.82■□□□□ 0.92
CLK2-201ENST00000355560 BUB1B-PAK6H3BSN5 160 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 KBTBD11O94819 623 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 HINT2Q9BX68 163 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 ENY2Q9NPA8 101 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 TMEM218A2RU14 115 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 RRHO14718 337 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 SCO1O75880 301 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 SCAF4O95104 1147 aaKnown RBP20.81■□□□□ 0.92
CLK2-201ENST00000355560 ARF6P62330 175 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 Q8N7P7 452 aa20.81■□□□□ 0.92
CLK2-201ENST00000355560 A0A1B0GV50 99 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 OPN1MWP04001 364 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 OPN1MW2P0DN77 364 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 OPN1MW3P0DN78 364 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 MC5RP33032 325 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 SNCAP37840 140 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 PNKDQ8N490 385 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 OR4P4Q8NGL7 312 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 SIRT7Q9NRC8 400 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 OVOL3O00110 214 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 APOC3P02656 99 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 HNF4GQ14541 408 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 VWC2Q2TAL6 325 aa20.8■□□□□ 0.92
CLK2-201ENST00000355560 MS4A7Q9GZW8 240 aaPredicted RBP20.8■□□□□ 0.92
CLK2-201ENST00000355560 IGHV3-72A0A0B4J1Y9 119 aa20.79■□□□□ 0.92
CLK2-201ENST00000355560 GOSR1O95249 250 aa20.79■□□□□ 0.92
CLK2-201ENST00000355560 ETV3LQ6ZN32 361 aa20.79■□□□□ 0.92
CLK2-201ENST00000355560 COMMD1Q8N668 190 aa20.79■□□□□ 0.92
CLK2-201ENST00000355560 TMEM170AQ8WVE7 144 aa20.79■□□□□ 0.92
CLK2-201ENST00000355560 TACC2O95359 2948 aa20.78■□□□□ 0.92
CLK2-201ENST00000355560 PRCDQ00LT1 54 aa20.78■□□□□ 0.92
CLK2-201ENST00000355560 DPPA3Q6W0C5 159 aa20.78■□□□□ 0.92
CLK2-201ENST00000355560 ZNF843Q8N446 348 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms