RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ZNF391Q9UJN7 358 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 TECTAO75443 2155 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 CADP27708 2225 aa7.89□□□□□ -1.15
SMG6-202ENST00000354901 A0A0G2JRQ6 117 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 SERTM2A0A1B0GWG4 89 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 CLEC18AA5D8T8 446 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 CD300LBA8K4G0 201 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 TOX4O94842 621 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 IGKV1D-33P01593 117 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 IGKV1-33P01594 117 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 UQCRFS1P47985 274 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 LINC00310P59036 64 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 BAXQ07812 192 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 STUMQ69YW2 141 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 CLEC18CQ8NCF0 446 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 PRDM14Q9GZV8 571 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 PSENENQ9NZ42 101 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 PPP1R3CQ9UQK1 317 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 NEURL1O76050 574 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 C3orf79P0CE67 100 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 ZNF83P51522 516 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 FGF12P61328 243 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 HOXA4Q00056 320 aaPredicted RBP7.88□□□□□ -1.15
SMG6-202ENST00000354901 PLP2Q04941 152 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 OR1C1Q15619 314 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 HAPLN4Q86UW8 402 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 ODF3L1Q8IXM7 274 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 RCHY1Q96PM5 261 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 OR4C12Q96R67 309 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 GTSF1LQ9H1H1 148 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 GNB4Q9HAV0 340 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 OR1A1Q9P1Q5 309 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 KCNS2Q9ULS6 477 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 CACNA1HO95180 2353 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 RBMXL2O75526 392 aaKnown RBP7.88□□□□□ -1.15
SMG6-202ENST00000354901 CLDN1O95832 211 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 TOMM40O96008 361 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 PSG2P11465 335 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 GABRA6Q16445 453 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 SPINK9Q5DT21 86 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 MRPL54Q6P161 138 aaKnown RBP7.88□□□□□ -1.15
SMG6-202ENST00000354901 RPP25LQ8N5L8 163 aaKnown RBP7.88□□□□□ -1.15
SMG6-202ENST00000354901 OR10G4Q8NGN3 311 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 P2RX4Q99571 388 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 LRFN3Q9BTN0 628 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 DEFB127Q9H1M4 99 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 CHODLQ9H9P2 273 aa7.88□□□□□ -1.15
SMG6-202ENST00000354901 MUC21A0A0G2JKD1 596 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 MUC21A0A140T8X8 626 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 CEACAM21Q3KPI0 293 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 KRTAP27-1Q3LI81 207 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 PLA2G2CQ5R387 149 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 APOBEC3DQ96AK3 386 aaPredicted RBP7.87□□□□□ -1.15
SMG6-202ENST00000354901 STRADBQ9C0K7 418 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 CACNG5Q9UF02 275 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 TTC28Q96AY4 2481 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 CLDN18P56856 261 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 ASPHD1Q5U4P2 390 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 OR5P3Q8WZ94 311 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 SPSB4Q96A44 273 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 TMEM186Q96B77 213 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 MCRIP2Q9BUT9 160 aaKnown RBP7.87□□□□□ -1.15
SMG6-202ENST00000354901 TTTY12Q9BZ98 90 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 WDR61Q9GZS3 305 aaKnown RBP7.87□□□□□ -1.15
SMG6-202ENST00000354901 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 B4GALT7Q9UBV7 327 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 ANKRD30BLA7E2S9 258 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 RBFOX2O43251 390 aaKnown RBP eCLIP7.87□□□□□ -1.152e-6■■■■□ 23.3
SMG6-202ENST00000354901 SLC25A17O43808 307 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 PGLYRP1O75594 196 aaPredicted RBP7.87□□□□□ -1.15
SMG6-202ENST00000354901 KRASP01116 189 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 VDAC1P21796 283 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 SRPXP78539 464 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
SMG6-202ENST00000354901 KRTCAP3Q53RY4 240 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 ATP1A1-AS1Q5TC04 95 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 TMEM251Q8N6I4 163 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 STXBP6Q8NFX7 210 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 OR10W1Q8NGF6 305 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 GPR146Q96CH1 333 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 FAM173AQ9BQD7 235 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 ARRDC1-AS1Q9H2J1 176 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 FNDC4Q9H6D8 234 aaPredicted RBP7.87□□□□□ -1.15
SMG6-202ENST00000354901 ELOVL5Q9NYP7 299 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 PCNX2A6NKB5 2137 aa7.87□□□□□ -1.15
SMG6-202ENST00000354901 YLPM1P49750 1951 aaKnown RBP7.86□□□□□ -1.15
SMG6-202ENST00000354901 KIR2DS1A0A191URI9 304 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 OR5B21A6NL26 309 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 APOA2P02652 100 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 KIR2DS4P43632 304 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 SELENOVP59797 346 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 KIR2DS1Q14954 304 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 COLCA1Q6ZS62 124 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 OR8I2Q8N0Y5 310 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 ATP23Q9Y6H3 246 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 PCSK5Q92824 1860 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms