RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TMEM186Q96B77 213 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 RHOVQ96L33 236 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM147Q9BVK8 224 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 MRPL20Q9BYC9 149 aaKnown RBP5.64□□□□□ -1.51
TRIM55-203ENST00000350034 SLC35D1Q9NTN3 355 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM14BQ9NUH8 114 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 UQCC1Q9NVA1 299 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 ZNRD1Q9P1U0 126 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TCF19Q9Y242 345 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 ATMQ13315 3056 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 ARID1AO14497 2285 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 RAI1Q7Z5J4 1906 aaPredicted RBP5.64□□□□□ -1.51
TRIM55-203ENST00000350034 DSCAML1Q8TD84 2053 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 ARFGEF3Q5TH69 2177 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 MGAQ8IWI9 3026 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 BTBD17A6NE02 478 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 SRRM4A7MD48 611 aaKnown RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 C9JQL5 133 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 PRSS46E5RG02 174 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 TSPAN15O95858 294 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 PRH1P02810 166 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 OR2B8PP59922 312 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 HSPE1P61604 102 aaKnown RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 SERF2P84101 59 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 RTL8BQ17RB0 113 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 AKR1C8PQ5T2L2 129 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 WDR25Q64LD2 544 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 SSX9Q7RTT3 188 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 THNSL2Q86YJ6 484 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 OR10P1Q8NGE3 313 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 OR13D1Q8NGV5 346 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 OR4A16Q8NH70 328 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 OSR1Q8TAX0 266 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 FAM213BQ8TBF2 198 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 SCGB1C1Q8TD33 95 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM170AQ8WVE7 144 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 MBD3L1Q8WWY6 194 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 TAF15Q92804 592 aaKnown RBP eCLIP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 PINX1Q96BK5 328 aaKnown RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 NEIL1Q96FI4 390 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 NABP2Q9BQ15 211 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 AIFM2Q9BRQ8 373 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 PCGF1Q9BSM1 259 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 RSG1Q9BU20 258 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 SEC11CQ9BY50 192 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 MS4A7Q9GZW8 240 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM133Q9H2Q1 129 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 BET1LQ9NYM9 111 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 MIOXQ9UGB7 285 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 PRNDQ9UKY0 176 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 ZNF257Q9Y2Q1 563 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 FAM96BQ9Y3D0 163 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 USP9YO00507 2555 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-203ENST00000350034 COL6A6A6NMZ7 2263 aa5.63□□□□□ -1.51
TRIM55-203ENST00000350034 CELSR1Q9NYQ6 3014 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 USF3Q68DE3 2245 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 ICE1Q9Y2F5 2266 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 SPENQ96T58 3664 aaKnown RBP5.62□□□□□ -1.51
TRIM55-203ENST00000350034 A6NNC1 897 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 INS-IGF2F8WCM5 200 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 C19orf84I3L1E1 186 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 AGPAT2O15120 278 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 RBMXL2O75526 392 aaKnown RBP5.62□□□□□ -1.51
TRIM55-203ENST00000350034 KBTBD11O94819 623 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 IFNA17P01571 189 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 IGLV1-47P01700 117 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 APOA2P02652 100 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 APOC3P02656 99 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 IGKV1-16P04430 117 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 RPP30P78346 268 aaKnown RBP5.62□□□□□ -1.51
TRIM55-203ENST00000350034 CCL20P78556 96 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 AKR1C1Q04828 323 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 ZNF616Q08AN1 781 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 PEA15Q15121 130 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 GUK1Q16774 197 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 SPINK9Q5DT21 86 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 AVPI1Q5T686 147 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 OR8G2PQ6IF36 304 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 ATRAIDQ6UW56 229 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 PDPNQ86YL7 162 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 ABHD12Q8N2K0 398 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 LILRB2Q8N423 598 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 Q8N7P7 452 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 OR8B3Q8NGG8 313 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 OR4A5Q8NH83 315 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 RAB1CQ92928 201 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 OR8B2Q96RD0 313 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 GGACTQ9BVM4 153 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 SMDT1Q9H4I9 107 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM231Q9H6L2 316 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 PATZ1Q9HBE1 687 aaKnown RBP5.62□□□□□ -1.51
TRIM55-203ENST00000350034 TREM1Q9NP99 234 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 RPRMQ9NS64 109 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 KIAA1456Q9P272 454 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 WDR83OSQ9Y284 106 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 FBXO7Q9Y3I1 522 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
TRIM55-203ENST00000350034 F8P00451 2351 aa5.62□□□□□ -1.51
TRIM55-203ENST00000350034 NBEAL1Q6ZS30 2694 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 PDZD2O15018 2839 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms