RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 FLYWCH2Q96CP2 140 aaKnown RBP12.44□□□□□ -0.42
NUP50-201ENST00000347635 GOLT1BQ9Y3E0 138 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 RNF115Q9Y4L5 304 aa12.44□□□□□ -0.42
NUP50-201ENST00000347635 WNT5AP41221 380 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 ABHD12Q8N2K0 398 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 OR1L8Q8NGR8 309 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 OR2V2Q96R30 315 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 GSX1Q9H4S2 264 aaPredicted RBP12.43□□□□□ -0.42
NUP50-201ENST00000347635 SMPD2O60906 423 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 HLA-DQA1P01909 254 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 TRBV9A0A0B4J1U6 114 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 AMY1AP04745 511 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 SOD3P08294 240 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 GCHFRP30047 84 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 OTX1P32242 354 aaPredicted RBP12.43□□□□□ -0.42
NUP50-201ENST00000347635 SPACA3Q8IXA5 215 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 MMD2Q8IY49 270 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 PERPQ96FX8 193 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 TCF19Q9Y242 345 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 CD99P14209 185 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 HIST1H2BLQ99880 126 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 NDFIP1Q9BT67 221 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
NUP50-201ENST00000347635 WNT9BO14905 357 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 HSPE1P61604 102 aaKnown RBP12.42□□□□□ -0.42
NUP50-201ENST00000347635 TMEM42Q69YG0 159 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 FOXL2NBQ6ZUU3 175 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 OR2D3Q8NGH3 330 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 TRBV24-1A0A075B6N3 115 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 ATP5G3P48201 142 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 LYZP61626 148 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 STPG3Q8N7X2 389 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 STXBP6Q8NFX7 210 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 ATXN7O15265 892 aaPredicted RBP12.42□□□□□ -0.42
NUP50-201ENST00000347635 CBLN1P23435 193 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 MFAP2P55001 183 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 TNXAQ16473 311 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 AAMDCQ9H7C9 122 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 CALYQ9NYX4 217 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 YTHDF2Q9Y5A9 579 aaKnown RBP12.42□□□□□ -0.42
NUP50-201ENST00000347635 RNF224P0DH78 156 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 Q56UQ5 140 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 TEX29Q8N6K0 151 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 GNB4Q9HAV0 340 aa12.42□□□□□ -0.42
NUP50-201ENST00000347635 SEBOXQ9HB31 216 aaPredicted RBP12.42□□□□□ -0.42
NUP50-201ENST00000347635 NEURL1O76050 574 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 PRSS3P2Q8NHM4 247 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 CBY3A6NI87 242 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 FXYD3Q14802 87 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 EP400Q96L91 3159 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 CRYBB3P26998 211 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
NUP50-201ENST00000347635 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
NUP50-201ENST00000347635 LHX2P50458 406 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 ACP7Q6ZNF0 438 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 GGNQ86UU5 652 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 WDR31Q8NA23 367 aa12.41□□□□□ -0.42
NUP50-201ENST00000347635 NUP210Q8TEM1 1887 aaPredicted RBP12.41□□□□□ -0.42
NUP50-201ENST00000347635 NAPSAO96009 420 aa12.4□□□□□ -0.42
NUP50-201ENST00000347635 IL6RP08887 468 aaPredicted RBP12.4□□□□□ -0.42
NUP50-201ENST00000347635 CLDN18P56856 261 aa12.4□□□□□ -0.42
NUP50-201ENST00000347635 MAP1LC3CQ9BXW4 147 aa12.4□□□□□ -0.42
NUP50-201ENST00000347635 JOSD1Q15040 202 aaPredicted RBP12.4□□□□□ -0.42
NUP50-201ENST00000347635 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
NUP50-201ENST00000347635 ASCL4Q6XD76 172 aa12.4□□□□□ -0.42
NUP50-201ENST00000347635 IL36BQ9NZH7 164 aa12.4□□□□□ -0.42
NUP50-201ENST00000347635 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.43
NUP50-201ENST00000347635 TCF21O43680 179 aa12.4□□□□□ -0.43
NUP50-201ENST00000347635 OR4A8P0C604 315 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
NUP50-201ENST00000347635 NDUFAF3Q9BU61 184 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 C1RLQ9NZP8 487 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 UQCR10Q9UDW1 63 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 SCO2A0A1W2PP80 73 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 SS18L1O75177 396 aaPredicted RBP12.39□□□□□ -0.43
NUP50-201ENST00000347635 CD55P08174 381 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 FAM87AP0C7U9 286 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 OR2T6Q8NHC8 308 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 DEPPQ9NTK1 212 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 RAXQ9Y2V3 346 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 RAMP3O60896 148 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 TMEM11P17152 192 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 COL8A1P27658 744 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 SRIP30626 198 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 NHLH1Q02575 133 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 ZNF146Q15072 292 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 B9A039 149 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 CSN3P07498 182 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 GLRXP35754 106 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 TMEM30BQ3MIR4 351 aa12.39□□□□□ -0.43
NUP50-201ENST00000347635 TEX50A0A1B0GTY4 177 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 C1QTNF9BB2RNN3 333 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 LINC00869P0C866 280 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms