RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RPEQ96AT9 228 aa8.85□□□□□ -0.99
ECM1-201ENST00000346569 RITA1Q96K30 269 aa8.85□□□□□ -0.99
ECM1-201ENST00000346569 QTRT1Q9BXR0 403 aaKnown RBP8.85□□□□□ -0.99
ECM1-201ENST00000346569 MS4A7Q9GZW8 240 aaPredicted RBP8.85□□□□□ -0.99
ECM1-201ENST00000346569 RBKSQ9H477 322 aa8.85□□□□□ -0.99
ECM1-201ENST00000346569 LPAR2Q9HBW0 351 aa8.85□□□□□ -0.99
ECM1-201ENST00000346569 LYRM2Q9NU23 88 aaPredicted RBP8.85□□□□□ -0.99
ECM1-201ENST00000346569 TMEM14BQ9NUH8 114 aa8.85□□□□□ -0.99
ECM1-201ENST00000346569 WSB1Q9Y6I7 421 aa8.85□□□□□ -0.99
ECM1-201ENST00000346569 IGHV3-72A0A0B4J1Y9 119 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 CENPVL3A0A0U1RRI6 287 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 OOSP1A8MZH6 123 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 B4DSR2 109 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 TAAR5O14804 337 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 MED6O75586 246 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 CRYGBP07316 175 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 SAA1P0DJI8 122 aaPredicted RBP8.84□□□□□ -0.99
ECM1-201ENST00000346569 CD1BP29016 333 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 CEACAM3P40198 252 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 RAB13P51153 203 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 SPCS3P61009 180 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 HSPE1P61604 102 aaKnown RBP8.84□□□□□ -0.99
ECM1-201ENST00000346569 VAMP2P63027 116 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 MOB3BQ86TA1 216 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 KRTAP1-3Q8IUG1 177 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 DYNAPQ8N1N2 210 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 OR8H1Q8NGG4 311 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 OR4A16Q8NH70 328 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 RNF5Q99942 180 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 ARPC5LQ9BPX5 153 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 CACFD1Q9UGQ2 172 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 FOXA2Q9Y261 457 aaPredicted RBP8.84□□□□□ -0.99
ECM1-201ENST00000346569 TBL2Q9Y4P3 447 aaKnown RBP8.84□□□□□ -0.99
ECM1-201ENST00000346569 ZNF469Q96JG9 3925 aaPredicted RBP8.84□□□□□ -0.99
ECM1-201ENST00000346569 POLQO75417 2590 aa8.84□□□□□ -0.99
ECM1-201ENST00000346569 KANTRA0A1W2PQU2 76 aa8.83□□□□□ -1
ECM1-201ENST00000346569 A0A1W2PRD5 423 aa8.83□□□□□ -1
ECM1-201ENST00000346569 A0A1W2PRF3 423 aa8.83□□□□□ -1
ECM1-201ENST00000346569 A0A1W2PRM7 423 aa8.83□□□□□ -1
ECM1-201ENST00000346569 IGSF23A1L1A6 192 aa8.83□□□□□ -1
ECM1-201ENST00000346569 C15orf61A6NNL5 157 aa8.83□□□□□ -1
ECM1-201ENST00000346569 KBTBD11O94819 623 aa8.83□□□□□ -1
ECM1-201ENST00000346569 MSMBP08118 114 aa8.83□□□□□ -1
ECM1-201ENST00000346569 RPL23AP62750 156 aaKnown RBP8.83□□□□□ -1
ECM1-201ENST00000346569 EWSR1Q01844 656 aaKnown RBP eCLIP8.83□□□□□ -1
ECM1-201ENST00000346569 MRGPRG-AS1Q2M3A8 158 aa8.83□□□□□ -1
ECM1-201ENST00000346569 CLEC9AQ6UXN8 241 aa8.83□□□□□ -1
ECM1-201ENST00000346569 ZNF767PQ75MW2 155 aa8.83□□□□□ -1
ECM1-201ENST00000346569 PDZD9Q8IXQ8 264 aa8.83□□□□□ -1
ECM1-201ENST00000346569 TMEM167AQ8TBQ9 72 aa8.83□□□□□ -1
ECM1-201ENST00000346569 MALSU1Q96EH3 234 aa8.83□□□□□ -1
ECM1-201ENST00000346569 HARBI1Q96MB7 349 aa8.83□□□□□ -1
ECM1-201ENST00000346569 SLC25A31Q9H0C2 315 aa8.83□□□□□ -1
ECM1-201ENST00000346569 WFDC1Q9HC57 220 aa8.83□□□□□ -1
ECM1-201ENST00000346569 PSENENQ9NZ42 101 aa8.83□□□□□ -1
ECM1-201ENST00000346569 ABCA2Q9BZC7 2435 aa8.83□□□□□ -1
ECM1-201ENST00000346569 TEX50A0A1B0GTY4 177 aa8.82□□□□□ -1
ECM1-201ENST00000346569 TIMM23O14925 209 aa8.82□□□□□ -1
ECM1-201ENST00000346569 RBMXL2O75526 392 aaKnown RBP8.82□□□□□ -1
ECM1-201ENST00000346569 LY86O95711 162 aa8.82□□□□□ -1
ECM1-201ENST00000346569 FGF2P09038 288 aa8.82□□□□□ -1
ECM1-201ENST00000346569 IAPPP10997 89 aa8.82□□□□□ -1
ECM1-201ENST00000346569 VDAC2P45880 294 aaPredicted RBP8.82□□□□□ -1
ECM1-201ENST00000346569 CAV2P51636 162 aa8.82□□□□□ -1
ECM1-201ENST00000346569 LGALS4P56470 323 aa8.82□□□□□ -1
ECM1-201ENST00000346569 OR2B8PP59922 312 aa8.82□□□□□ -1
ECM1-201ENST00000346569 EBI3Q14213 229 aa8.82□□□□□ -1
ECM1-201ENST00000346569 TMEM14EPQ6UXP3 125 aa8.82□□□□□ -1
ECM1-201ENST00000346569 TEX45Q8NA69 505 aa8.82□□□□□ -1
ECM1-201ENST00000346569 OR4A5Q8NH83 315 aa8.82□□□□□ -1
ECM1-201ENST00000346569 STOML3Q8TAV4 291 aa8.82□□□□□ -1
ECM1-201ENST00000346569 DTD1Q8TEA8 209 aa8.82□□□□□ -1
ECM1-201ENST00000346569 C17orf50Q8WW18 174 aa8.82□□□□□ -1
ECM1-201ENST00000346569 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
ECM1-201ENST00000346569 ZNF471Q9BX82 626 aaPredicted RBP8.82□□□□□ -1
ECM1-201ENST00000346569 REG4Q9BYZ8 158 aa8.82□□□□□ -1
ECM1-201ENST00000346569 PRNDQ9UKY0 176 aa8.82□□□□□ -1
ECM1-201ENST00000346569 TCF19Q9Y242 345 aa8.82□□□□□ -1
ECM1-201ENST00000346569 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
ECM1-201ENST00000346569 HILPDAQ9Y5L2 63 aa8.82□□□□□ -1
ECM1-201ENST00000346569 TNCP24821 2201 aa8.81□□□□□ -1
ECM1-201ENST00000346569 TRAV20A0A0B4J274 112 aa8.81□□□□□ -1
ECM1-201ENST00000346569 PMS2P5A8MQ11 134 aa8.81□□□□□ -1
ECM1-201ENST00000346569 VENTXO95231 258 aa8.81□□□□□ -1
ECM1-201ENST00000346569 IFNA17P01571 189 aa8.81□□□□□ -1
ECM1-201ENST00000346569 GATA3P23771 443 aa8.81□□□□□ -1
ECM1-201ENST00000346569 EXOSC2Q13868 293 aaKnown RBP8.81□□□□□ -1
ECM1-201ENST00000346569 PSG5Q15238 335 aa8.81□□□□□ -1
ECM1-201ENST00000346569 SSX2Q16385 188 aa8.81□□□□□ -1
ECM1-201ENST00000346569 RPL7L1Q6DKI1 246 aaKnown RBP8.81□□□□□ -1
ECM1-201ENST00000346569 CCDC144NLQ6NUI1 221 aa8.81□□□□□ -1
ECM1-201ENST00000346569 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
ECM1-201ENST00000346569 LINC01356Q8N9X3 169 aa8.81□□□□□ -1
ECM1-201ENST00000346569 VSTM2AQ8TAG5 236 aa8.81□□□□□ -1
ECM1-201ENST00000346569 ST8SIA2Q92186 375 aa8.81□□□□□ -1
ECM1-201ENST00000346569 CIB3Q96Q77 187 aaPredicted RBP8.81□□□□□ -1
ECM1-201ENST00000346569 ARV1Q9H2C2 271 aa8.81□□□□□ -1
ECM1-201ENST00000346569 FKBP11Q9NYL4 201 aa8.81□□□□□ -1
ECM1-201ENST00000346569 FBXL17Q9UF56 701 aa8.81□□□□□ -1
ECM1-201ENST00000346569 AUP1Q9Y679 476 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms