RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 UCP3P55916 312 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 MORN2Q502X0 79 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 CCDC144NLQ6NUI1 221 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 SPNS3Q6ZMD2 512 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 ZNF66Q6ZN08 573 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 RPUSD4Q96CM3 377 aaKnown RBP9.71□□□□□ -0.86
C2orf88-201ENST00000340623 SH3BGRL3Q9H299 93 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
C2orf88-201ENST00000340623 CYB5BO43169 146 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 ZNF737O75373 536 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 CFHR2P36980 270 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 HMGN3Q15651 99 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 PCSK4Q6UW60 755 aa9.71□□□□□ -0.86
C2orf88-201ENST00000340623 S1PR2O95136 353 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 DLX1P56177 255 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 FAM53AQ6NSI3 398 aaPredicted RBP9.7□□□□□ -0.86
C2orf88-201ENST00000340623 FRYQ5TBA9 3013 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 SONP18583 2426 aaKnown RBP9.7□□□□□ -0.86
C2orf88-201ENST00000340623 SLC25A4P12235 298 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 UBE2G2P60604 165 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 ADIRFQ15847 76 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 KHDC1LQ5JSQ8 128 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
C2orf88-201ENST00000340623 UBAC2Q8NBM4 344 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 RNF126Q9BV68 326 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 TMEM133Q9H2Q1 129 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 ARFGEF3Q5TH69 2177 aa9.7□□□□□ -0.86
C2orf88-201ENST00000340623 HPRT1P00492 218 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 EWSR1Q01844 656 aaKnown RBP eCLIP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 DHRS7BQ6IAN0 325 aaPredicted RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 FAM24BQ8N5W8 94 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 VSTM2AQ8TAG5 236 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 FRZBQ92765 325 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 CIB3Q96Q77 187 aaPredicted RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 NIPSNAP3BQ9BS92 247 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 SLC25A17O43808 307 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 LMO1P25800 156 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 SUB1P53999 127 aaKnown RBP eCLIP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 OR10P1Q8NGE3 313 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 ASB13Q8WXK3 278 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 TMEM186Q96B77 213 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 MSI2Q96DH6 328 aaKnown RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 SEBOXQ9HB31 216 aaPredicted RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 YPEL1O60688 119 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 HKR1P10072 659 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 USF1P22415 310 aaPredicted RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 SUPT4H1P63272 117 aaKnown RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 HTD2P86397 168 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 KLRD1Q13241 179 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 DAZAP2Q15038 168 aaPredicted RBP9.69□□□□□ -0.86
C2orf88-201ENST00000340623 YPEL2Q96QA6 119 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 DPM3Q9P2X0 92 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 WASHC3Q9Y3C0 194 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 RFNGQ9Y644 331 aa9.69□□□□□ -0.86
C2orf88-201ENST00000340623 USP24Q9UPU5 2620 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 UBE2CO00762 179 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SIAH2O43255 324 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
C2orf88-201ENST00000340623 CD24P25063 80 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 HERPUD1Q15011 391 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 HEPN1Q6WQI6 88 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 MRPL20Q9BYC9 149 aaKnown RBP9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SAA2-SAA4A0A096LPE2 208 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SLC31A2O15432 143 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SYNGR2O43760 224 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 DFFBO76075 338 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 IFNA1P01562 189 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SAA2P0DJI9 122 aaPredicted RBP9.68□□□□□ -0.86
C2orf88-201ENST00000340623 ATP6V0CP27449 155 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 KIAA0141Q14154 515 aaPredicted RBP9.68□□□□□ -0.86
C2orf88-201ENST00000340623 LY6EQ16553 131 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 CLDND2Q8NHS1 167 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SPOCK3Q9BQ16 436 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 RSG1Q9BU20 258 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 MMP26Q9NRE1 261 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 DBX1A6NMT0 343 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 MC5RP33032 325 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 TMEM155Q4W5P6 130 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 HIST2H2BCQ6DN03 193 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 PHYHIPLQ96FC7 376 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 TMEM56Q96MV1 263 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 HES4Q9HCC6 221 aa9.68□□□□□ -0.86
C2orf88-201ENST00000340623 IGKV1-6A0A0C4DH72 117 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 MARCH11A6NNE9 402 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 SCGB2A1O75556 95 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 CDS2O95674 445 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 CD8AP01732 235 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 TMEM187Q14656 261 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 LIME1Q9H400 295 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 C1RLQ9NZP8 487 aa9.67□□□□□ -0.86
C2orf88-201ENST00000340623 ZNRD1Q9P1U0 126 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms