RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OR2C3Q8N628 320 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 RAB40CQ96S21 281 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 IGHV3OR16-10A0A075B7F0 116 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 TRAV20A0A0B4J274 112 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 H3BP45 60 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 MED6O75586 246 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 PAX9P55771 341 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 RPL23AP62750 156 aaKnown RBP11.84□□□□□ -0.51
CBX3-201ENST00000337620 DYNAPQ8N1N2 210 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 C1orf159Q96HA4 380 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 SLA2Q9H6Q3 261 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 NUP50Q9UKX7 468 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 TBL2Q9Y4P3 447 aaKnown RBP11.84□□□□□ -0.51
CBX3-201ENST00000337620 C15orf61A6NNL5 157 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 UPK2O00526 184 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 BCL2L11O43521 198 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 GPR137BO60478 399 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 SAA4P35542 130 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 LGALS7P47929 136 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 GPR157Q5UAW9 335 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 KRTAP1-3Q8IUG1 177 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 OR8H1Q8NGG4 311 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 LYRM2Q9NU23 88 aaPredicted RBP11.83□□□□□ -0.52
CBX3-201ENST00000337620 BET1LQ9NYM9 111 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 CELSR1Q9NYQ6 3014 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 UNC79Q9P2D8 2635 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 NPFFO15130 113 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 IGLV2-23P01705 113 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 CD24P25063 80 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 PUSL1Q8N0Z8 303 aaKnown RBP11.83□□□□□ -0.52
CBX3-201ENST00000337620 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
CBX3-201ENST00000337620 SLC25A17O43808 307 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 KBTBD11O94819 623 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 TGFAP01135 160 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
CBX3-201ENST00000337620 MYOD1P15172 320 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 CNTFRP26992 372 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 CD1BP29016 333 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 SPCS3P61009 180 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 NHLH2Q02577 135 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 VMA21Q3ZAQ7 101 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 ZNF429Q86V71 674 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 VSTM2AQ8TAG5 236 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 CFHR4Q92496 578 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 MALSU1Q96EH3 234 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 ZNF471Q9BX82 626 aaPredicted RBP11.82□□□□□ -0.52
CBX3-201ENST00000337620 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 TMEM14BQ9NUH8 114 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 PRNDQ9UKY0 176 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 WSB1Q9Y6I7 421 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 ITPR2Q14571 2701 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 HECTD1Q9ULT8 2610 aa11.82□□□□□ -0.52
CBX3-201ENST00000337620 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 IGSF23A1L1A6 192 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 VENTXO95231 258 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 OPN1MWP04001 364 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 OPN1MW2P0DN77 364 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 OPN1MW3P0DN78 364 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
CBX3-201ENST00000337620 HNF4GQ14541 408 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 AARDQ4LEZ3 155 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 SPANXN5Q5MJ07 72 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 RUSC1-AS1Q66K80 236 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 TMEM252Q8N6L7 170 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 BSCL2Q96G97 398 aaPredicted RBP11.81□□□□□ -0.52
CBX3-201ENST00000337620 SMIM8Q96KF7 97 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 FOXA2Q9Y261 457 aaPredicted RBP11.81□□□□□ -0.52
CBX3-201ENST00000337620 PDZD2O15018 2839 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 IGHV1-69DA0A0B4J2H0 117 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 CST7O76096 145 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 IGKV1D-33P01593 117 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 IGKV1-33P01594 117 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 IGHV1-69P01742 117 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 GATA3P23771 443 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 HES1Q14469 280 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 SLC51BQ86UW2 128 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 HINT2Q9BX68 163 aa11.81□□□□□ -0.52
CBX3-201ENST00000337620 SPDEFO95238 335 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 TAS2R30P59541 319 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 HSPE1P61604 102 aaKnown RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 RPL8P62917 257 aaKnown RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 TMEM267Q0VDI3 215 aaPredicted RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 HABP2Q14520 560 aaPredicted RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 BRD3OSQ6XYD6 125 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 WFDC11Q8NEX6 87 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 AJUBAQ96IF1 538 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms