RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 COL4A3Q01955 1670 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 KBTBD11O94819 623 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 TRGC1P0CF51 173 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 MMDQ15546 238 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 CSRP2Q16527 193 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 ZNF324BQ6AW86 544 aaPredicted RBP11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 ZNF497Q6ZNH5 498 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 DNM1P46Q6ZS02 220 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
DNMT3B-202ENST00000328111 CCL21O00585 134 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 PAX6P26367 422 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 SRSF4Q08170 494 aaKnown RBP11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 ZGRF1Q86YA3 2104 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 AMMECR1Q9Y4X0 333 aaPredicted RBP11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 FOXL2NBQ6ZUU3 175 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 SLX1AQ9BQ83 275 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 WDR73Q6P4I2 378 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 ASCL5Q7RTU5 278 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 ZNF785A8K8V0 405 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 PSPNO60542 156 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 FOXF2Q12947 444 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 RTP5Q14D33 572 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 RSPO1Q2MKA7 263 aaPredicted RBP11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 WDR82Q6UXN9 313 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 CLDND2Q8NHS1 167 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 PRR14LQ5THK1 2151 aa11.59□□□□□ -0.55
DNMT3B-202ENST00000328111 TMEM250H0YL14 139 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 RPL27AP46776 148 aaKnown RBP11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 HLA-DRB5Q30154 266 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 C2orf16Q68DN1 1984 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 TRAV34A0A0B4J273 112 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 WIPF3A6NGB9 483 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 AGAP20933 346 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 GNG7O60262 68 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 CD5P06127 495 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 USF1P22415 310 aaPredicted RBP11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 OR5AU1Q8NGC0 362 aa11.58□□□□□ -0.56
DNMT3B-202ENST00000328111 SS18L1O75177 396 aaPredicted RBP11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 NTF4P34130 210 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 RND2P52198 227 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 PQLC2Q6ZP29 291 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 RASL11BQ9BPW5 248 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 CCKARP32238 428 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 CDX1P47902 265 aaPredicted RBP11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 LRP11Q86VZ4 500 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 ZCCHC24Q8N2G6 241 aaKnown RBP11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 DIRC2Q96SL1 478 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 THYN1Q9P016 225 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 CA2P00918 260 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 MFAP2P55001 183 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 FAM162BQ5T6X4 162 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 TXNDC17Q9BRA2 123 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 OBSL1O75147 1896 aa11.57□□□□□ -0.56
DNMT3B-202ENST00000328111 ZNF729A6NN14 1252 aaPredicted RBP11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 CRYBB3P26998 211 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 COL8A1P27658 744 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 ICAM4Q14773 271 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 PERPQ96FX8 193 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 CSN3P07498 182 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 KLHDC1Q8N7A1 406 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 STPG3Q8N7X2 389 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 FAM222BQ8WU58 562 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 HILPDAQ9Y5L2 63 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 RRHO14718 337 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 REG1AP05451 166 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 CD40P25942 277 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 HTR1DP28221 377 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 OR8I2Q8N0Y5 310 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 CDX4O14627 284 aaPredicted RBP11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 TMEM171Q8WVE6 324 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 WFIKKN1Q96NZ8 548 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 NABP2Q9BQ15 211 aa11.56□□□□□ -0.56
DNMT3B-202ENST00000328111 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 ATXN7O15265 892 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 MC5RP33032 325 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 STXBP6Q8NFX7 210 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 MED13Q9UHV7 2174 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 G0S2P27469 103 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 PRR7Q8TB68 274 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 Q8WTZ3 238 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 VSIRQ9H7M9 311 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 HYPMO75409 117 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 P01737 135 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 ARL16Q0P5N6 197 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 SRSF6Q13247 344 aaKnown RBP11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 FXYD3Q14802 87 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms