RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CLDN15P56746 228 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 SCGB2A2Q13296 93 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 C20orf196Q8IYI0 205 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 FAM89BQ8N5H3 189 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 ASB10Q8WXI3 467 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 RCHY1Q96PM5 261 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 C12orf49Q9H741 205 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 ANXA10Q9UJ72 324 aa7.9□□□□□ -1.14
CAPN3-201ENST00000318023 MUC21A0A0G2JKD1 596 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 MUC21A0A140T8X8 626 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 RBFOX2O43251 390 aaKnown RBP eCLIP7.89□□□□□ -1.151e-6■■■■■ 32.4
CAPN3-201ENST00000318023 ZNF823P16415 610 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 NTF3P20783 257 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 MUC21Q5SSG8 566 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 ATG4DQ86TL0 474 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-201ENST00000318023 SCGB1C1Q8TD33 95 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 ITLN2Q8WWU7 325 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-201ENST00000318023 DERL1Q9BUN8 251 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 PBOV1Q9GZY1 135 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 GTSF1LQ9H1H1 148 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 CSPG4Q6UVK1 2322 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 FBN2P35556 2912 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 TRAV8-6A0A0B4J262 113 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 A0A0G2JNJ9 132 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 SERINC4A6NH21 518 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 TRAF3IP2O43734 574 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-201ENST00000318023 CRYAAP02489 173 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 PPIAL4GP0DN37 164 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 THBS3P49746 956 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 SRPXP78539 464 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 ZP4Q12836 540 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 LRRC10Q5BKY1 277 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 C9orf106Q8NAJ2 232 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 ZNF114Q8NC26 417 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 STXBP6Q8NFX7 210 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 LIPHQ8WWY8 451 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 OR5P3Q8WZ94 311 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 NEUROG1Q92886 237 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 GNB4Q9HAV0 340 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 SLC39A9Q9NUM3 307 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 FBLN5Q9UBX5 448 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 Q9UFV3 132 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 APCP25054 2843 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 IGKV1D-33P01593 117 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 IGKV1-33P01594 117 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 CEACAM3P40198 252 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 ECI1P42126 302 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 PSMB3P49720 205 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 PAX2Q02962 417 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 MUC15Q8N387 334 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 LRTM2Q8N967 370 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 FER1L6-AS1Q8NA97 138 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 MBD3L1Q8WWY6 194 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
CAPN3-201ENST00000318023 FAM206AQ9NX38 181 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 POLR1DQ9Y2S0 133 aa7.89□□□□□ -1.15
CAPN3-201ENST00000318023 FREM1Q5H8C1 2179 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 ALG1L2C9J202 215 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 FCN1O00602 326 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 SPINK4O60575 86 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 NUDT3O95989 172 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 CELA3BP08861 270 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 SRD5A2P31213 254 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 FUT6P51993 359 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 BAXQ07812 192 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 IZUMO4Q1ZYL8 232 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 ZNF695Q8IW36 515 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 OR1B1Q8NGR6 318 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 OR4S2Q8NH73 311 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 IGKV1D-43A0A0B4J1Z2 117 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 ZNF816-ZNF321PA0A0X1KG74 233 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 HLA-DOBP13765 273 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 NPPCP23582 126 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 S100GP29377 79 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 IER3P46695 156 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 DSCR4P56555 118 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-201ENST00000318023 SEM1Q6ZVN7 128 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 PSMG3-AS1Q96PY0 264 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 PLSCR4Q9NRQ2 329 aa7.88□□□□□ -1.15
CAPN3-201ENST00000318023 UBE2J1Q9Y385 318 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-201ENST00000318023 PAGE4O60829 102 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 ESDP10768 282 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 RPL27P61353 136 aaKnown RBP7.87□□□□□ -1.15
CAPN3-201ENST00000318023 ARF6P62330 175 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 ZNF141Q15928 474 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 PLPPR5Q32ZL2 321 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 ACSF3Q4G176 576 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-201ENST00000318023 Q56UQ5 140 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 C9orf135Q5VTT2 229 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 OR10V1Q8NGI7 309 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
CAPN3-201ENST00000318023 TRAV26-1A0A087WT03 109 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 G3V4G9 280 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 EFNA2O43921 213 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 IGLL1P15814 213 aa7.87□□□□□ -1.15
CAPN3-201ENST00000318023 RPS20P60866 119 aaKnown RBP7.87□□□□□ -1.15
CAPN3-201ENST00000318023 KLHL24Q6TFL4 600 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms