RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 Q6YL49 198 aa12.29□□□□□ -0.44
PDLIM5-202ENST00000318007 TEX29Q8N6K0 151 aa12.29□□□□□ -0.44
PDLIM5-202ENST00000318007 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
PDLIM5-202ENST00000318007 KIAA1456Q9P272 454 aa12.29□□□□□ -0.44
PDLIM5-202ENST00000318007 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 IFNA21P01568 189 aa12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 IAH1Q2TAA2 248 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 C9orf152Q5JTZ5 239 aa12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 CHAC2Q8WUX2 184 aa12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 COMMD9Q9P000 198 aa12.28□□□□□ -0.44
PDLIM5-202ENST00000318007 OR2A4O95047 310 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 CD300CQ08708 224 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 VMA21Q3ZAQ7 101 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 NMSQ5H8A3 153 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 C11orf87Q6NUJ2 197 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 LRTM2Q8N967 370 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 OR2A7Q96R45 310 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 FAM103A1Q9BTL3 118 aaKnown RBP12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 ESM1Q9NQ30 184 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 TMEM160Q9NX00 188 aa12.27□□□□□ -0.44
PDLIM5-202ENST00000318007 SMLR1H3BR10 107 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 RRHO14718 337 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 KBTBD11O94819 623 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 OR2F2O95006 317 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 TNXAQ16473 311 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 GSG1LQ6UXU4 331 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 Q8N6K4 173 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 OR5M8Q8NGP6 311 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 OR4A16Q8NH70 328 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 OR1S1Q8NH92 325 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 SSMEM1Q8WWF3 244 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 TSNAXQ99598 290 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 QTRT1Q9BXR0 403 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 MAGT1Q9H0U3 335 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 ZNF430Q9H8G1 570 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 RAB18Q9NP72 206 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 PLSCR3Q9NRY6 295 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 TMED3Q9Y3Q3 217 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 MMP24Q9Y5R2 645 aa12.27□□□□□ -0.45
PDLIM5-202ENST00000318007 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 CA2P00918 260 aa12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 LGALS7P47929 136 aa12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 BCAP31P51572 246 aa12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 THOC7Q6I9Y2 204 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 IL22RA2Q969J5 263 aa12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 SIGLEC9Q9Y336 463 aa12.26□□□□□ -0.45
PDLIM5-202ENST00000318007 SULT1A3P0DMM9 295 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 SULT1A4P0DMN0 295 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 UBE2KP61086 200 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 BLCAPP62952 87 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 EBI3Q14213 229 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 CXorf66Q5JRM2 361 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 PPP1R27Q86WC6 154 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 Q8N9W7 124 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 ABHD5Q8WTS1 349 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 RBM14Q96PK6 669 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 TNCP24821 2201 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 A6NDX4 124 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 E7EUB6 86 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 SNAPC5O75971 98 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 ATG12O94817 140 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 DYNLT3P51808 116 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 S100A10P60903 97 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 RELBQ01201 579 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 C5orf64Q2M2E5 130 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 Q6ZS46 218 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 FAM71E2Q8N5Q1 922 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 GRPEL2Q8TAA5 225 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 FYTTD1Q96QD9 318 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 FAM212BQ9NTI7 297 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 LINC00527Q9UJ94 153 aa12.25□□□□□ -0.45
PDLIM5-202ENST00000318007 ACTL6BO94805 426 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 CNIH1O95406 144 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 IFNA17P01571 189 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 P0C879 139 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 SMCO1Q147U7 214 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 THNSL2Q86YJ6 484 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 LSM10Q969L4 123 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
PDLIM5-202ENST00000318007 TET2Q6N021 2002 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 UPK2O00526 184 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 ST8SIA3O43173 380 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 CRLF1O75462 422 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 RPL8P62917 257 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 C5orf56Q8N8D9 126 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 NPBQ8NG41 125 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 ZNF436Q9C0F3 470 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 BET1LQ9NYM9 111 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 LSM5Q9Y4Y9 91 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 OR51B2Q9Y5P1 312 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms