RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 ZNF90Q03938 601 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 ZNF705AQ6ZN79 300 aaPredicted RBP12.43□□□□□ -0.42
TFE3-201ENST00000315869 MS4A10Q96PG2 267 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 IMMP2LQ96T52 175 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 HIPK2Q9H2X6 1198 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 NPIPB11E5RHQ5 1161 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 NPPCP23582 126 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 ZNF146Q15072 292 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 LRRC29Q8WV35 223 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
TFE3-201ENST00000315869 AQP7O14520 342 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 RPL29P47914 159 aaKnown RBP12.42□□□□□ -0.42
TFE3-201ENST00000315869 RAB4BP61018 213 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 GNB1P62873 340 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 CYB5R2Q6BCY4 276 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 PIP4P1Q86T03 277 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 ZNF114Q8NC26 417 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 COQ2Q96H96 371 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 GCM1Q9NP62 436 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 SPRR3Q9UBC9 169 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 SS18L1O75177 396 aaPredicted RBP12.42□□□□□ -0.42
TFE3-201ENST00000315869 IGHV1-2P23083 117 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 RPL39P5Q59GN2 51 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 WIPI2Q9Y4P8 454 aa12.42□□□□□ -0.42
TFE3-201ENST00000315869 CENPEQ02224 2701 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 TNRC6AQ8NDV7 1962 aaKnown RBP12.41□□□□□ -0.42
TFE3-201ENST00000315869 RAB29O14966 203 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 CD82P27701 267 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 Q6ZR03 302 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 TGIF2LYQ8IUE0 185 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 OR5R1Q8NH85 324 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 SLC17A3O00476 420 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 RRHO14718 337 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 LINC01551Q86U37 167 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 ACY3Q96HD9 319 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 AGMATQ9BSE5 352 aa12.41□□□□□ -0.42
TFE3-201ENST00000315869 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
TFE3-201ENST00000315869 SCO2A0A1W2PP80 73 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 TCAPO15273 167 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 MLNRO43193 412 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 CBLN1P23435 193 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 SSTP61278 116 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 SMIM21Q3B7S5 101 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 CISD2Q8N5K1 135 aaKnown RBP12.4□□□□□ -0.42
TFE3-201ENST00000315869 DEFB108BQ8NET1 73 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 ENY2Q9NPA8 101 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 SLC35B1P78383 322 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 FOXF2Q12947 444 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 TOMM20LQ6UXN7 152 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 BAGE3Q86Y29 109 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 BAGE2Q86Y30 109 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 SMG1Q96Q15 3661 aaKnown RBP12.4□□□□□ -0.42
TFE3-201ENST00000315869 WNK2Q9Y3S1 2297 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 C15orf62A8K5M9 175 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 A8MWP6 167 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 TM4SF5O14894 197 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 TP53TG5Q9Y2B4 290 aa12.4□□□□□ -0.42
TFE3-201ENST00000315869 TRAV3A0A0B4J244 114 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 GCGP01275 180 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 SRP14P37108 136 aaKnown RBP12.39□□□□□ -0.43
TFE3-201ENST00000315869 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 ACP7Q6ZNF0 438 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 S1PR3Q99500 378 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
TFE3-201ENST00000315869 HCFC1P51610 2035 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 EREGO14944 169 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 TAS2R60P59551 318 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
TFE3-201ENST00000315869 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 PDE6DO43924 150 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
TFE3-201ENST00000315869 SLC35E4Q6ICL7 350 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 ZNRF1Q8ND25 227 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 TBX15Q96SF7 602 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 NDUFAF3Q9BU61 184 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
TFE3-201ENST00000315869 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
TFE3-201ENST00000315869 MDS2Q8NDY4 140 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 SFRP2Q96HF1 295 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 GP6Q9HCN6 339 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 YLPM1P49750 1951 aaKnown RBP12.38□□□□□ -0.43
TFE3-201ENST00000315869 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
TFE3-201ENST00000315869 PRDX2P32119 198 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 ACTL10Q5JWF8 245 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 WDR82Q6UXN9 313 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 OR4P4Q8NGL7 312 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 NOL4LQ96MY1 436 aaPredicted RBP12.38□□□□□ -0.43
TFE3-201ENST00000315869 PYGO2Q9BRQ0 406 aa12.38□□□□□ -0.43
TFE3-201ENST00000315869 SERTAD4Q9NUC0 356 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms