RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 BAK1Q16611 211 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 ZNF57Q68EA5 555 aaPredicted RBP6.21□□□□□ -1.42
CDC42-201ENST00000315554 SSX9Q7RTT3 188 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 ZNF329Q86UD4 541 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 LHFPL1Q86WI0 220 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 SPAG16Q8N0X2 631 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 ARRDC1Q8N5I2 433 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 NPBQ8NG41 125 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 OR51S1Q8NGJ8 323 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 MARCH1Q8TCQ1 289 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 ABHD5Q8WTS1 349 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 MRGPRFQ96AM1 343 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 TSNAXQ99598 290 aaKnown RBP6.21□□□□□ -1.42
CDC42-201ENST00000315554 SDHCQ99643 169 aaPredicted RBP6.21□□□□□ -1.42
CDC42-201ENST00000315554 HSD17B10Q99714 261 aaKnown RBP6.21□□□□□ -1.42
CDC42-201ENST00000315554 ZNF747Q9BV97 191 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 PARP11Q9NR21 331 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 BATF3Q9NR55 127 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 MCUBQ9NWR8 336 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 PRELID3BQ9Y3B1 194 aa6.21□□□□□ -1.42
CDC42-201ENST00000315554 IGHV7-81A0A0B4J1V7 117 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 S1PR2O95136 353 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 CA2P00918 260 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 IGHG2P01859 326 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 SAA1P0DJI8 122 aaPredicted RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 RRASP10301 218 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 CD28P10747 220 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 TBPP20226 339 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 PCP4P48539 62 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 MECP2P51608 486 aaKnown RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 TNP2Q05952 138 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 CATR1Q13166 79 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 KLF9Q13886 244 aaPredicted RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 MEF2DQ14814 521 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 CENPVQ7Z7K6 275 aaPredicted RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 TBC1D26Q86UD7 250 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 TOMM5Q8N4H5 51 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 OR13C8Q8NGS7 320 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 OR4S2Q8NH73 311 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 RCC1LQ96I51 464 aaKnown RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 FAM103A1Q9BTL3 118 aaKnown RBP6.2□□□□□ -1.42
CDC42-201ENST00000315554 WNT10AQ9GZT5 417 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 HRASLSQ9HDD0 168 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 FBXO7Q9Y3I1 522 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 WSB1Q9Y6I7 421 aa6.2□□□□□ -1.42
CDC42-201ENST00000315554 DNHD1Q96M86 4753 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 A0A1W2PRX2 142 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 HMX3A6NHT5 357 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 G3V318 75 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 ATP6V0E1O15342 81 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 HLA-DRB1P01911 266 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 CRYGBP07316 175 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 LPAR6P43657 344 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 INPP1P49441 399 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 CX3CL1P78423 397 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 MSMO1Q15800 293 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 ECSCRQ19T08 205 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 VMA21Q3ZAQ7 101 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 TRIQKQ629K1 86 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 FOXRED2Q8IWF2 684 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 CMTM1Q8IZ96 169 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 SLC38A6Q8IZM9 456 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 STPG2Q8N412 459 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 OR5AU1Q8NGC0 362 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 TERB2Q8NHR7 220 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 GRPEL2Q8TAA5 225 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 RNF125Q96EQ8 232 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 RNF5Q99942 180 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 SSBP4Q9BWG4 385 aaPredicted RBP6.19□□□□□ -1.42
CDC42-201ENST00000315554 KRTAP4-11Q9BYQ6 195 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 OR51J1Q9H342 316 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 AKIP1Q9NQ31 210 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 SLC2A9Q9NRM0 540 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 PTTG2Q9NZH5 202 aa6.19□□□□□ -1.42
CDC42-201ENST00000315554 PSMB11A5LHX3 300 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 AP4M1O00189 453 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 ARPC1BO15143 372 aaKnown RBP6.18□□□□□ -1.42
CDC42-201ENST00000315554 SPDEFO95238 335 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 CLEC3BP05452 202 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 APELAP0DMC3 54 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 MYOD1P15172 320 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 KIR2DS2P43631 304 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 LGALS7P47929 136 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 UCP3P55916 312 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 PIGPP57054 158 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 UBE2KP61086 200 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 TNXAQ16473 311 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 MRGPRG-AS1Q2M3A8 158 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 NSUN5P1Q3KNT7 163 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 TCTEX1D4Q5JR98 221 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 KHDC1LQ5JSQ8 128 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 TOR2AQ5JU69 321 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 C10orf55Q5SWW7 151 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 LPCAT3Q6P1A2 487 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 SHISA2Q6UWI4 295 aa6.18□□□□□ -1.42
CDC42-201ENST00000315554 GDPD1Q8N9F7 314 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms