RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 EAF1Q96JC9 268 aaPredicted RBP9.07□□□□□ -0.96
ZNF558-201ENST00000301475 GNB1LQ9BYB4 327 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 DOCK10Q96BY6 2186 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 NEURL1O76050 574 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 COX6A1P12074 109 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 SSPNQ14714 243 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 ETFRF1Q6IPR1 90 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 TREML4Q6UXN2 200 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 TMEM136Q6ZRR5 245 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 IMMP1LQ96LU5 166 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 MGST2Q99735 147 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 PTPRBP23467 1997 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 TRBV9A0A0B4J1U6 114 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 A0A1W2PQM1 296 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 DPRXA6NFQ7 191 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 SRD5A2P31213 254 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 WIPI1Q5MNZ9 446 aaPredicted RBP9.06□□□□□ -0.96
ZNF558-201ENST00000301475 WDR86Q86TI4 376 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 SPEM1Q8N4L4 309 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 POM121L2Q96KW2 1035 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 GGTLC1Q9BX51 225 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 KNTC1P50748 2209 aa9.06□□□□□ -0.96
ZNF558-201ENST00000301475 LOC102723996A0A087X1L8 192 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 IGHV2OR16-5A0A0B4J2B6 119 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 IGHV3-64DA0A0J9YX35 117 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 OR5B21A6NL26 309 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 BMPR1BO00238 502 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 RAB29O14966 203 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 CXorf1O96002 111 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 CA2P00918 260 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 SRIP30626 198 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 PRRX1P54821 245 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 SPATA46Q5T0L3 261 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 DCAF12Q5T6F0 453 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 H2BFWTQ7Z2G1 175 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 OR52L2PQ8NGH6 319 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 DNAJC13O75165 2243 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 LINC00473A8K010 186 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 C9JCJ5 164 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 WISP2O76076 250 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 CEBPDP49716 269 aaPredicted RBP9.05□□□□□ -0.96
ZNF558-201ENST00000301475 TCL1AP56279 114 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 HTD2P86397 168 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 GUSBP11Q6P575 273 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 ZNF738Q8NE65 137 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 C11orf52Q96A22 123 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 IGHV5-10-1A0A0J9YXX1 117 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 ANKRD30BLA7E2S9 258 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 J3QT63 122 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 GCHFRP30047 84 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 OPRK1P41145 380 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 FXYD3Q14802 87 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 RNF151Q2KHN1 245 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 MORN2Q502X0 79 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 RPS19BP1Q86WX3 136 aaKnown RBP9.05□□□□□ -0.96
ZNF558-201ENST00000301475 SSMEM1Q8WWF3 244 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 KCNE4Q8WWG9 221 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 PKIBQ9C010 78 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 MS4A5Q9H3V2 200 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
ZNF558-201ENST00000301475 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
ZNF558-201ENST00000301475 IGHV2-70DA0A0C4DH43 119 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 C12orf77C9JDV5 145 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 OR9G9P0C7N8 305 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 CLDN18P56856 261 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 CX3CL1P78423 397 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 NRN1LQ496H8 165 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 FBLN7Q53RD9 439 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 ALKBH2Q6NS38 261 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 TIPARPQ7Z3E1 657 aaKnown RBP9.04□□□□□ -0.96
ZNF558-201ENST00000301475 DOLPP1Q86YN1 238 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 C1orf159Q96HA4 380 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 CLEC7AQ9BXN2 247 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 RNASE7Q9H1E1 156 aaKnown RBP9.04□□□□□ -0.96
ZNF558-201ENST00000301475 OCIAD1Q9NX40 245 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 MRPS16Q9Y3D3 137 aaKnown RBP9.04□□□□□ -0.96
ZNF558-201ENST00000301475 TECTAO75443 2155 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 IGHV2-26A0A0B4J1V2 119 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 A8MXE2 369 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 M0QZ24 198 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 FOXH1O75593 365 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 NTF3P20783 257 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 HOXA4Q00056 320 aaPredicted RBP9.04□□□□□ -0.96
ZNF558-201ENST00000301475 CATR1Q13166 79 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 PDLIM3Q53GG5 364 aaPredicted RBP9.04□□□□□ -0.96
ZNF558-201ENST00000301475 OR4F17Q8NGA8 305 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 AHCTF1Q8WYP5 2266 aa9.04□□□□□ -0.96
ZNF558-201ENST00000301475 URB1O60287 2271 aaKnown RBP9.03□□□□□ -0.96
ZNF558-201ENST00000301475 TRGV10A0A0A0MS01 117 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 FAM166BA8MTA8 275 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 MRPL33O75394 65 aaKnown RBP9.03□□□□□ -0.96
ZNF558-201ENST00000301475 MT-ND6P03923 174 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 RAC2P15153 192 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 LPAL2Q16609 132 aa9.03□□□□□ -0.96
ZNF558-201ENST00000301475 CENPWQ5EE01 88 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms