RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 OVOL2Q9BRP0 275 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 HERC2O95714 4834 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 A0A1B0GW64 132 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 FAM223BA6NKX1 122 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 TEX22C9J3V5 150 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 SCAF4O95104 1147 aaKnown RBP6.94□□□□□ -1.3
CNOT9-202ENST00000295701 LY6G6CO95867 125 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 IL6RP08887 468 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-202ENST00000295701 RRASP10301 218 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 CBLN1P23435 193 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 CALRP27797 417 aaKnown RBP6.94□□□□□ -1.3
CNOT9-202ENST00000295701 OR10A3P58181 314 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 FABP5Q01469 135 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 CBX3Q13185 183 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 PMS2P11Q13670 270 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 CDK10Q15131 360 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 C15orf32Q32M92 178 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 OGFRL1Q5TC84 451 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-202ENST00000295701 FAM223AQ8IWN6 122 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 LAX1Q8IWV1 398 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 H1FOOQ8IZA3 346 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-202ENST00000295701 RAB3CQ96E17 227 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 GINS4Q9BRT9 223 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 DCUN1D5Q9BTE7 237 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 ZC4H2Q9NQZ6 224 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 MLXQ9UH92 298 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 RAB22AQ9UL26 194 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 V9GY05 133 aa6.94□□□□□ -1.3
CNOT9-202ENST00000295701 TMEM213A2RRL7 107 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 RAB27BO00194 218 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 MFNGO00587 321 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 FCGR3BO75015 233 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 GGCTO75223 188 aaKnown RBP6.93□□□□□ -1.3
CNOT9-202ENST00000295701 TUSC2O75896 110 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 MAP2K4P45985 399 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 MRPS15P82914 257 aaKnown RBP6.93□□□□□ -1.3
CNOT9-202ENST00000295701 TPBGQ13641 420 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 CLEC19AQ6UXS0 136 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 NECAP1Q8NC96 275 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 OR10R2Q8NGX6 335 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 CCDC140Q96MF4 163 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 FYTTD1Q96QD9 318 aaKnown RBP6.93□□□□□ -1.3
CNOT9-202ENST00000295701 GPHA2Q96T91 129 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 ST6GALNAC5Q9BVH7 336 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 C8orf4Q9NR00 106 aa6.93□□□□□ -1.3
CNOT9-202ENST00000295701 IGKV1D-13A0A0B4J2D9 117 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 A0A0J9YWU9 116 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 ZNF320A2RRD8 509 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 ACTL6BO94805 426 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 IGLV2-14P01704 120 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 REG1AP05451 166 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 IGKV1-13P0DP09 117 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 AREGP15514 252 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 NFYAP23511 347 aaPredicted RBP6.92□□□□□ -1.3
CNOT9-202ENST00000295701 VAMP1P23763 118 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 ARL3P36405 182 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 BRWD1-AS2P59051 145 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 ZNF57Q68EA5 555 aaPredicted RBP6.92□□□□□ -1.3
CNOT9-202ENST00000295701 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 MMD2Q8IY49 270 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 UXS1Q8NBZ7 420 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 OSR1Q8TAX0 266 aaPredicted RBP6.92□□□□□ -1.3
CNOT9-202ENST00000295701 ADTRPQ96IZ2 230 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 SPIN2AQ99865 258 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 SPIN2BQ9BPZ2 258 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 OR51E2Q9H255 320 aa6.92□□□□□ -1.3
CNOT9-202ENST00000295701 TECRQ9NZ01 308 aaKnown RBP6.92□□□□□ -1.3
CNOT9-202ENST00000295701 LOC102724200A0A096LPH7 203 aaPredicted RBP6.91□□□□□ -1.3
CNOT9-202ENST00000295701 SMIM30A4D0T7 59 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 CXorf65A6NEN9 183 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 CGB1A6NKQ9 187 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 LGALS9O00182 355 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 EBAG9O00559 213 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 CASQ2O14958 399 aaPredicted RBP6.91□□□□□ -1.3
CNOT9-202ENST00000295701 ARL6IP5O75915 188 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 HIST1H1DP16402 221 aaKnown RBP6.91□□□□□ -1.3
CNOT9-202ENST00000295701 RPL27AP46776 148 aaKnown RBP6.91□□□□□ -1.3
CNOT9-202ENST00000295701 ARFRP1Q13795 201 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 BTNL8Q6UX41 500 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 UNQ9165/PRO28630Q6UXU0 137 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 KCTD9Q7L273 389 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 SSX9Q7RTT3 188 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 PUSL1Q8N0Z8 303 aaKnown RBP6.91□□□□□ -1.3
CNOT9-202ENST00000295701 OR52B4Q8NGK2 314 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 GGTLC1Q9BX51 225 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 SLC2A9Q9NRM0 540 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 SCN3BQ9NY72 215 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 SPATA2Q9UM82 520 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 ZNF257Q9Y2Q1 563 aa6.91□□□□□ -1.3
CNOT9-202ENST00000295701 MFSD2BA6NFX1 497 aa6.9□□□□□ -1.3
CNOT9-202ENST00000295701 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.3
CNOT9-202ENST00000295701 KBTBD11O94819 623 aa6.9□□□□□ -1.3
CNOT9-202ENST00000295701 DIRAS3O95661 229 aa6.9□□□□□ -1.3
CNOT9-202ENST00000295701 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms