RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 WDR61Q9GZS3 305 aaKnown RBP13.57□□□□□ -0.24
HIF3A-203ENST00000291300 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
HIF3A-203ENST00000291300 IGHV2-26A0A0B4J1V2 119 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 A6NNC1 897 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-203ENST00000291300 RTL8BQ17RB0 113 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 UQCC3Q6UW78 93 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 RAB1CQ92928 201 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 TREM1Q9NP99 234 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
HIF3A-203ENST00000291300 TSPAN15O95858 294 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 COX7A1P24310 79 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 SNCAP37840 140 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 PDLIM3Q53GG5 364 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-203ENST00000291300 SPSB3Q6PJ21 355 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 ZNF429Q86V71 674 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 C8orf31Q8N9H6 132 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 OR52E5Q8NH55 327 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 IGFBPL1Q8WX77 278 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 CIB3Q96Q77 187 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-203ENST00000291300 VPS13CQ709C8 3753 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 HRASP01112 189 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 RAB5CP51148 216 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 SSX7Q7RTT5 188 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 Q8N7P7 452 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 C8orf46Q8TAG6 207 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 SCGB1C1Q8TD33 95 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 CHODLQ9H9P2 273 aa13.55□□□□□ -0.24
HIF3A-203ENST00000291300 HEYLQ9NQ87 328 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-203ENST00000291300 FOXA2Q9Y261 457 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-203ENST00000291300 FAM157AC9JC47 383 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 RNASEK-C17orf49H0YIS7 233 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 TRIM77I1YAP6 450 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 UPK2O00526 184 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 CD5P06127 495 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 ZNF137PP52743 207 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 LDLRAD2Q5SZI1 272 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 LY6G5BQ8NDX9 201 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 OR10P1Q8NGE3 313 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 TAF15Q92804 592 aaKnown RBP eCLIP13.54□□□□□ -0.24
HIF3A-203ENST00000291300 TMEM186Q96B77 213 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 RAB39BQ96DA2 213 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 TIMD4Q96H15 378 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 HARBI1Q96MB7 349 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 HINT2Q9BX68 163 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 UQCC1Q9NVA1 299 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 ONECUT1Q9UBC0 465 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 PLXNB1O43157 2135 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 DOPEY1Q5JWR5 2465 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 NUDT19A8MXV4 375 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 IFNA10P01566 189 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 HOXA1P49639 335 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-203ENST00000291300 GUCA2BQ16661 112 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 SP5Q6BEB4 398 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-203ENST00000291300 PATZ1Q9HBE1 687 aaKnown RBP13.54□□□□□ -0.24
HIF3A-203ENST00000291300 RPRMQ9NS64 109 aa13.54□□□□□ -0.24
HIF3A-203ENST00000291300 UMAD1C9J7I0 102 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 E7EUB6 86 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 HSPE1P61604 102 aaKnown RBP13.53□□□□□ -0.24
HIF3A-203ENST00000291300 ARF6P62330 175 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 GNB2P62879 340 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 DHRS7BQ6IAN0 325 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-203ENST00000291300 TGIF2LXQ8IUE1 241 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 PUSL1Q8N0Z8 303 aaKnown RBP13.53□□□□□ -0.24
HIF3A-203ENST00000291300 ZNF462Q96JM2 2506 aa13.53□□□□□ -0.24
HIF3A-203ENST00000291300 PRSS46E5RG02 174 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 IGLV2-23P01705 113 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 APOA2P02652 100 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-203ENST00000291300 DEFA5Q01523 94 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 HLA-DRB5Q30154 266 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 TMEM177Q53S58 311 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 PNKDQ8N490 385 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 SIRT7Q9NRC8 400 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 EPG5Q9HCE0 2579 aa13.52□□□□□ -0.24
HIF3A-203ENST00000291300 MYO18BQ8IUG5 2567 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 IGKV1D-33P01593 117 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 IGKV1-33P01594 117 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 PAX6P26367 422 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 ZFP36P26651 326 aaKnown RBP13.52□□□□□ -0.25
HIF3A-203ENST00000291300 LHX4Q969G2 390 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.25
HIF3A-203ENST00000291300 RARRES2Q99969 163 aa13.52□□□□□ -0.25
HIF3A-203ENST00000291300 SSBP3Q9BWW4 388 aaPredicted RBP13.52□□□□□ -0.25
HIF3A-203ENST00000291300 KBTBD11O94819 623 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 MDKP21741 143 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-203ENST00000291300 FGF7P21781 194 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 KLRD1Q13241 179 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 GUK1Q16774 197 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 ACSM6Q6P461 480 aa13.51□□□□□ -0.25
HIF3A-203ENST00000291300 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms