RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZNF596Q8TC21 504 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 WDR61Q9GZS3 305 aaKnown RBP17.04■□□□□ 0.32
YBX3-202ENST00000279550 TET2Q6N021 2002 aaPredicted RBP17.04■□□□□ 0.32
YBX3-202ENST00000279550 DOPEY2Q9Y3R5 2298 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 DOCK11Q5JSL3 2073 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 FAM157AC9JC47 383 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 J3QR06 171 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 IGKV1-16P04430 117 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 ARG1P05089 322 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 MYOD1P15172 320 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 ATP5J2P56134 94 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 DIAPH2-AS1Q14236 149 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 POU2AF1Q16633 256 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 GUCA2BQ16661 112 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 AKR1C8PQ5T2L2 129 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 OR13D1Q8NGV5 346 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 OR52E5Q8NH55 327 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 PARD6GQ9BYG4 376 aaPredicted RBP17.04■□□□□ 0.32
YBX3-202ENST00000279550 TCF19Q9Y242 345 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 CELSR2Q9HCU4 2923 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 TACC2O95359 2948 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 TRBV23-1A0A0A0MS06 115 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 C15orf61A6NNL5 157 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 SRRM4A7MD48 611 aaKnown RBP17.03■□□□□ 0.32
YBX3-202ENST00000279550 OR8U8P0C7N1 319 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 IGHV1-8P0DP01 117 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 REG1BP48304 166 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 PDLIM3Q53GG5 364 aaPredicted RBP17.03■□□□□ 0.32
YBX3-202ENST00000279550 LINC00311Q8N616 119 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 COMMD1Q8N668 190 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 OR8B3Q8NGG8 313 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 OR8B2Q96RD0 313 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 VSIRQ9H7M9 311 aa17.03■□□□□ 0.32
YBX3-202ENST00000279550 TMA7Q9Y2S6 64 aaKnown RBP17.03■□□□□ 0.32
YBX3-202ENST00000279550 F8W036 122 aa17.02■□□□□ 0.32
YBX3-202ENST00000279550 DVL1P1P54792 670 aaPredicted RBP17.02■□□□□ 0.32
YBX3-202ENST00000279550 DLX1P56177 255 aa17.02■□□□□ 0.32
YBX3-202ENST00000279550 KRTAP10-9P60411 292 aa17.02■□□□□ 0.32
YBX3-202ENST00000279550 C8orf31Q8N9H6 132 aa17.02■□□□□ 0.32
YBX3-202ENST00000279550 TAF15Q92804 592 aaKnown RBP eCLIP17.02■□□□□ 0.32
YBX3-202ENST00000279550 NEIL1Q96FI4 390 aaPredicted RBP17.02■□□□□ 0.32
YBX3-202ENST00000279550 TMEM147Q9BVK8 224 aa17.02■□□□□ 0.32
YBX3-202ENST00000279550 CARHSP1Q9Y2V2 147 aaKnown RBP17.02■□□□□ 0.32
YBX3-202ENST00000279550 CSMD2Q7Z408 3487 aa17.02■□□□□ 0.31
YBX3-202ENST00000279550 A0A087X0M5 115 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 A0A1B0GX30 115 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 GPR37O15354 613 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 IL6RP08887 468 aaPredicted RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 PAX1P15863 534 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 PDLIM4P50479 330 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 BTN1A1Q13410 526 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 GUK1Q16774 197 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 RTL8BQ17RB0 113 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 ZNF429Q86V71 674 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 ST6GALNAC6Q969X2 333 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 RAB39BQ96DA2 213 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 PSMG3Q9BT73 122 aaPredicted RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 BPESC1Q9GZL8 116 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 PATZ1Q9HBE1 687 aaKnown RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 TMEM14BQ9NUH8 114 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 FOXA2Q9Y261 457 aaPredicted RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 H0YJW9 148 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 HRASP01112 189 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 SFTA3P0C7M3 94 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 PRB3Q04118 309 aaPredicted RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 ATP6V1FQ16864 119 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 HIST2H2BCQ6DN03 193 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 DHRS7BQ6IAN0 325 aaPredicted RBP17.01■□□□□ 0.31
YBX3-202ENST00000279550 OR10P1Q8NGE3 313 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 OR10X1Q8NGY0 326 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 TMEM170AQ8WVE7 144 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 PERPQ96FX8 193 aa17.01■□□□□ 0.31
YBX3-202ENST00000279550 GNB2P62879 340 aa17■□□□□ 0.31
YBX3-202ENST00000279550 HNF4GQ14541 408 aa17■□□□□ 0.31
YBX3-202ENST00000279550 ABHD12Q8N2K0 398 aa17■□□□□ 0.31
YBX3-202ENST00000279550 NABP2Q9BQ15 211 aa17■□□□□ 0.31
YBX3-202ENST00000279550 TMEM133Q9H2Q1 129 aa17■□□□□ 0.31
YBX3-202ENST00000279550 HEYLQ9NQ87 328 aaPredicted RBP17■□□□□ 0.31
YBX3-202ENST00000279550 RPRMQ9NS64 109 aa17■□□□□ 0.31
YBX3-202ENST00000279550 UPK2O00526 184 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 H2AFB1P0C5Y9 115 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 VWC2Q2TAL6 325 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 WDR25Q64LD2 544 aaPredicted RBP16.99■□□□□ 0.31
YBX3-202ENST00000279550 PUSL1Q8N0Z8 303 aaKnown RBP16.99■□□□□ 0.31
YBX3-202ENST00000279550 OR5AN1Q8NGI8 311 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 OR9G1Q8NH87 305 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 FAM168AQ92567 244 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 SEC11CQ9BY50 192 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 RRHO14718 337 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 HOXA1P49639 335 aaPredicted RBP16.99■□□□□ 0.31
YBX3-202ENST00000279550 HSPE1P61604 102 aaKnown RBP16.99■□□□□ 0.31
YBX3-202ENST00000279550 ZNF726P1Q15940 193 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 DPPA3Q6W0C5 159 aa16.99■□□□□ 0.31
YBX3-202ENST00000279550 PINX1Q96BK5 328 aaKnown RBP16.99■□□□□ 0.31
YBX3-202ENST00000279550 IFNA10P01566 189 aa16.98■□□□□ 0.31
YBX3-202ENST00000279550 APOA2P02652 100 aa16.98■□□□□ 0.31
YBX3-202ENST00000279550 SAA1P0DJI8 122 aaPredicted RBP16.98■□□□□ 0.31
YBX3-202ENST00000279550 FGF7P21781 194 aa16.98■□□□□ 0.31
YBX3-202ENST00000279550 ZNF137PP52743 207 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms