RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IFNA4P05014 189 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 RELBQ01201 579 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 SLC25A48Q6ZT89 311 aaKnown RBP14.68□□□□□ -0.06
CAPN1-201ENST00000279247 SLC25A22Q9H936 323 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 CARHSP1Q9Y2V2 147 aaKnown RBP14.68□□□□□ -0.06
CAPN1-201ENST00000279247 PUS1Q9Y606 427 aaKnown RBP eCLIP14.68□□□□□ -0.06
CAPN1-201ENST00000279247 VPS13CQ709C8 3753 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 FAM157AC9JC47 383 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 LOXP28300 417 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-201ENST00000279247 THBS3P49746 956 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 SSX8Q7RTT4 187 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 OR13D1Q8NGV5 346 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 SCRT1Q9BWW7 348 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 CSMD1Q96PZ7 3565 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 RBFOX3A6NFN3 312 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 SRRM4A7MD48 611 aaKnown RBP14.68□□□□□ -0.06
CAPN1-201ENST00000279247 C15orf62A8K5M9 175 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 CIB3Q96Q77 187 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-201ENST00000279247 TCF19Q9Y242 345 aa14.68□□□□□ -0.06
CAPN1-201ENST00000279247 RCC1LQ96I51 464 aaKnown RBP14.67□□□□□ -0.06
CAPN1-201ENST00000279247 RPS10P5Q9NQ39 176 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 CSMD2Q7Z408 3487 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 OR8U8P0C7N1 319 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 ZNF726P1Q15940 193 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 ZNF672Q499Z4 452 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-201ENST00000279247 HEPN1Q6WQI6 88 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 CORO2AQ92828 525 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 HIPK2Q9H2X6 1198 aa14.67□□□□□ -0.06
CAPN1-201ENST00000279247 CENPEQ02224 2701 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 IGKV1D-33P01593 117 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 IGKV1-33P01594 117 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 ZNF787Q6DD87 383 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 TMEM147Q9BVK8 224 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 PMS2P5A8MQ11 134 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 SPCS3P61009 180 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 ACSM6Q6P461 480 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 CLRN3Q8NCR9 226 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 PINX1Q96BK5 328 aaKnown RBP14.66□□□□□ -0.06
CAPN1-201ENST00000279247 NCOR1P1Q9H4R4 102 aa14.66□□□□□ -0.06
CAPN1-201ENST00000279247 RTL8BQ17RB0 113 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 FFAR4Q5NUL3 377 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 C10orf91Q5T1B1 145 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 ZNF709Q8N972 641 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 RBFOX2O43251 390 aaKnown RBP eCLIP14.65□□□□□ -0.061e-5■■■■□ 19.7
CAPN1-201ENST00000279247 MEF2CQ06413 473 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-201ENST00000279247 EFNB3Q15768 340 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 GCSAMLQ5JQS6 135 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 SOHLH1Q5JUK2 328 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 LFNGQ8NES3 379 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 HARBI1Q96MB7 349 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 SLC35B3Q9H1N7 401 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 TMPRSS5Q9H3S3 457 aa14.65□□□□□ -0.06
CAPN1-201ENST00000279247 ENSAO43768 121 aaKnown RBP14.64□□□□□ -0.07
CAPN1-201ENST00000279247 COX7A1P24310 79 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 KIR2DS2P43631 304 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 FAM122CQ6P4D5 195 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 ENY2Q9NPA8 101 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 KPTNQ9Y664 436 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 SOD3P08294 240 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 FBXL19-AS1Q494R0 122 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 AWAT1Q58HT5 328 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 RPP25LQ8N5L8 163 aaKnown RBP14.64□□□□□ -0.07
CAPN1-201ENST00000279247 COMMD1Q8N668 190 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 CYB561D1Q8N8Q1 229 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 ISOC2Q96AB3 205 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 SLC39A9Q9NUM3 307 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 OR51B2Q9Y5P1 312 aa14.64□□□□□ -0.07
CAPN1-201ENST00000279247 PPIHO43447 177 aaKnown RBP14.63□□□□□ -0.07
CAPN1-201ENST00000279247 HRASP01112 189 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 FAM208BQ5VWN6 2430 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 MAP1LC3B2A6NCE7 125 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 C15orf61A6NNL5 157 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 SAA1P0DJI8 122 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-201ENST00000279247 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-201ENST00000279247 IGFBPL1Q8WX77 278 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 NPCDR1Q9BY65 106 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 MAP1LC3BQ9GZQ8 125 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 KIAA1456Q9P272 454 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 PAX6P26367 422 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 CD1BP29016 333 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 LHX4Q969G2 390 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 ADTRPQ96IZ2 230 aa14.63□□□□□ -0.07
CAPN1-201ENST00000279247 BBC3Q96PG8 261 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-201ENST00000279247 J3QR06 171 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 TMEM170AQ8WVE7 144 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 ITGB1BP1O14713 200 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 SOX15O60248 233 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 APOA2P02652 100 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 RAB11AP62491 216 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 ICAM4Q14773 271 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 TMEM41BQ5BJD5 291 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 OR10W1Q8NGF6 305 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 OR10G4Q8NGN3 311 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 OR10G9Q8NGN4 311 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 OR10G7Q8NGN6 311 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 SSMEM1Q8WWF3 244 aa14.62□□□□□ -0.07
CAPN1-201ENST00000279247 PATZ1Q9HBE1 687 aaKnown RBP14.62□□□□□ -0.07
CAPN1-201ENST00000279247 TNFRSF13BO14836 293 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-201ENST00000279247 SCAF4O95104 1147 aaKnown RBP14.61□□□□□ -0.07
CAPN1-201ENST00000279247 APELAP0DMC3 54 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms