RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 DNAJC4Q9NNZ3 241 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 AUP1Q9Y679 476 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.6
SMG9-201ENST00000270066 ZP1P60852 638 aa11.27□□□□□ -0.6
SMG9-201ENST00000270066 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.6
SMG9-201ENST00000270066 TMEM187Q14656 261 aa11.27□□□□□ -0.6
SMG9-201ENST00000270066 WDFY1Q8IWB7 410 aa11.27□□□□□ -0.6
SMG9-201ENST00000270066 OR4C12Q96R67 309 aa11.27□□□□□ -0.6
SMG9-201ENST00000270066 RPS11P62280 158 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMG9-201ENST00000270066 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
SMG9-201ENST00000270066 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.61
SMG9-201ENST00000270066 RPL7P18124 248 aaKnown RBP11.27□□□□□ -0.61
SMG9-201ENST00000270066 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
SMG9-201ENST00000270066 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.61
SMG9-201ENST00000270066 HAX1O00165 279 aa11.27□□□□□ -0.61
SMG9-201ENST00000270066 ZG16O60844 167 aa11.27□□□□□ -0.61
SMG9-201ENST00000270066 SPACA3Q8IXA5 215 aa11.27□□□□□ -0.61
SMG9-201ENST00000270066 DDB2Q92466 427 aa11.27□□□□□ -0.61
SMG9-201ENST00000270066 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
SMG9-201ENST00000270066 DPM3Q9P2X0 92 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 GCGP01275 180 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 TWIST1Q15672 202 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 ZNF343Q6P1L6 599 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 A1L4Q6 167 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
SMG9-201ENST00000270066 MRPL32Q9BYC8 188 aaKnown RBP11.26□□□□□ -0.61
SMG9-201ENST00000270066 PGPA6NDG6 321 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 MAS1LP35410 378 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 ATG101Q9BSB4 218 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 SEC16AO15027 2179 aa11.26□□□□□ -0.61
SMG9-201ENST00000270066 C17orf100A8MU93 164 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 TBX6O95947 436 aaPredicted RBP11.25□□□□□ -0.61
SMG9-201ENST00000270066 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 FHITP49789 147 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 RPS20P60866 119 aaKnown RBP11.25□□□□□ -0.61
SMG9-201ENST00000270066 SPATA45Q537H7 98 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
SMG9-201ENST00000270066 IGHV3OR16-10A0A075B7F0 116 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 SHISA3A0PJX4 238 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 SOD3P08294 240 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 NPPCP23582 126 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 TSPOP30536 169 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 LCN2P80188 198 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 PSG7Q13046 419 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 DUX5Q96PT3 197 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 PLAUP00749 431 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 HSPB1P04792 205 aaKnown RBP11.25□□□□□ -0.61
SMG9-201ENST00000270066 OR51G1Q8NGK1 321 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 AP5S1Q9NUS5 200 aa11.25□□□□□ -0.61
SMG9-201ENST00000270066 E9PLN8 166 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 PF4P02776 101 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 VKORC1Q9BQB6 163 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 C12orf77C9JDV5 145 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 REG1AP05451 166 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 SH3BGRL3Q9H299 93 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 RP1P56715 2156 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
SMG9-201ENST00000270066 CDC42EP3Q9UKI2 254 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 A8MXK9 166 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 NDUFB4O95168 129 aa11.24□□□□□ -0.61
SMG9-201ENST00000270066 IBA57Q5T440 356 aaKnown RBP11.24□□□□□ -0.61
SMG9-201ENST00000270066 A6NDN8 102 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 KLF7O75840 302 aaPredicted RBP11.23□□□□□ -0.61
SMG9-201ENST00000270066 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 RPL39P5Q59GN2 51 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 LINC00312Q9Y6C7 94 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 CCDC88CQ9P219 2028 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 FAM216BQ8N7L0 139 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 NUP37Q8NFH4 326 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 GPHA2Q96T91 129 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 VKORC1L1Q8N0U8 176 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 OR8A1Q8NGG7 326 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 MT-ND6P03923 174 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 RND3P61587 244 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
SMG9-201ENST00000270066 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
SMG9-201ENST00000270066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
SMG9-201ENST00000270066 MFAP2P55001 183 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 MRPL13Q9BYD1 178 aaKnown RBP11.22□□□□□ -0.61
SMG9-201ENST00000270066 TRGV3P03979 118 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 C17orf82Q86X59 251 aaPredicted RBP11.22□□□□□ -0.61
SMG9-201ENST00000270066 C1QL2Q7Z5L3 287 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 OR4B1Q8NGF8 309 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 UBE2L6O14933 153 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 DLX1P56177 255 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 ZNF646O15015 1829 aaPredicted RBP11.22□□□□□ -0.61
SMG9-201ENST00000270066 CKAP5Q14008 2032 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 CELA3BP08861 270 aa11.22□□□□□ -0.61
SMG9-201ENST00000270066 GCSHP23434 173 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms