RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LRRC30A6NM36 301 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 SPINT2O43291 252 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 GNG7O60262 68 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 C1orf185Q5T7R7 199 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 CHEK1O14757 476 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 IGHV3-48P01763 117 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 UBE2G1P62253 170 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 RBX1P62877 108 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 AGMATQ9BSE5 352 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 MMP17Q9ULZ9 603 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 FZR1Q9UM11 496 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 PLAUP00749 431 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 PDLIM4P50479 330 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 TM4SF20Q53R12 229 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 ZPBPQ9BS86 351 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 SYNGR3O43761 229 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
GPC1-201ENST00000264039 SPATA31B1PQ5VZV4 182 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 BLNKQ8WV28 456 aa13.72□□□□□ -0.21
GPC1-201ENST00000264039 LSM10Q969L4 123 aaKnown RBP13.72□□□□□ -0.21
GPC1-201ENST00000264039 MED13LQ71F56 2210 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 KIAA1549Q9HCM3 1950 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
GPC1-201ENST00000264039 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 CA2P00918 260 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 IGKV1-39P01597 117 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 IGKV1D-39P04432 117 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 RAB30Q15771 203 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 OCIAD2Q56VL3 154 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 SZT2Q5T011 3432 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 OR5B21A6NL26 309 aa13.71□□□□□ -0.21
GPC1-201ENST00000264039 PCDH15Q96QU1 1955 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 MUC21A0A0G2JKD1 596 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 MUC21A0A140T8X8 626 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 DSCR4P56555 118 aaPredicted RBP13.71□□□□□ -0.22
GPC1-201ENST00000264039 MUC21Q5SSG8 566 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 CLEC2AQ6UVW9 174 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 MUC15Q8N387 334 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 HILPDAQ9Y5L2 63 aa13.71□□□□□ -0.22
GPC1-201ENST00000264039 A0A1W2PS18 150 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 CFIP05156 583 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 GCHFRP30047 84 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 ZNF83P51522 516 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 GMPPAQ96IJ6 420 aaPredicted RBP13.7□□□□□ -0.22
GPC1-201ENST00000264039 GPR179Q6PRD1 2367 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 VPS13AQ96RL7 3174 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 TYMSP04818 313 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 TNXAQ16473 311 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 TMEM108Q6UXF1 575 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 ZNF826PQ6ZT77 177 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 IL36GQ9NZH8 169 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 NBASA2RRP1 2371 aa13.7□□□□□ -0.22
GPC1-201ENST00000264039 A0A087X0K7 114 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 OR2H2O95918 312 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 COL8A2P25067 703 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 FCER1GP30273 86 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 RAC1P63000 192 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 NABP1Q96AH0 204 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 PRRX1P54821 245 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 RIPPLY2Q5TAB7 128 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 TMEM191AQ9H0A3 160 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 SH2D2AQ9NP31 389 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 GAGE12BA1L429 117 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 FOXH1O75593 365 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 HLA-DQA1P01909 254 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 ANKRD39Q53RE8 183 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
GPC1-201ENST00000264039 LEPROTL1O95214 131 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 MT-ND6P03923 174 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 RAC3P60763 192 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 UBE2L3P68036 154 aaKnown RBP13.68□□□□□ -0.22
GPC1-201ENST00000264039 HOXA4Q00056 320 aaPredicted RBP13.68□□□□□ -0.22
GPC1-201ENST00000264039 NHLH1Q02575 133 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 C3AR1Q16581 482 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 Q6ZPA2 131 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 HSPB7Q9UBY9 170 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 ZNF835Q9Y2P0 537 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 TRAV9-2A0A087WT02 112 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 CD24P25063 80 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 CEACAM21Q3KPI0 293 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.68□□□□□ -0.22
GPC1-201ENST00000264039 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
GPC1-201ENST00000264039 SEPSECSQ9HD40 501 aaKnown RBP13.68□□□□□ -0.22
GPC1-201ENST00000264039 RNF114Q9Y508 228 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 ETV2O00321 342 aaPredicted RBP13.68□□□□□ -0.22
GPC1-201ENST00000264039 NDUFB8O95169 186 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 CDKN1BP46527 198 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 ARG2P78540 354 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 KCNMB1Q16558 191 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 RTL8AQ9BWD3 113 aa13.68□□□□□ -0.22
GPC1-201ENST00000264039 IGHV2OR16-5A0A0B4J2B6 119 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 H3BTX0 84 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 PLP1P60201 277 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 S1PR3Q99500 378 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 ZNF391Q9UJN7 358 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 TRBV20OR9-2A0A075B6H5 130 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms