RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 TSC22D2O75157 780 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 TAS2R30P59541 319 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 UBE2KP61086 200 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 LHFPL4Q7Z7J7 247 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 Q96MF0 132 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 CIB3Q96Q77 187 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-216ENST00000259951 TSNAXQ99598 290 aaKnown RBP13.51□□□□□ -0.25
HLA-F-216ENST00000259951 C11orf1Q9H5F2 150 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 C7orf69Q9H7B7 122 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 HIF1ANQ9NWT6 349 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 FKBP11Q9NYL4 201 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 WSB1Q9Y6I7 421 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.51□□□□□ -0.25
HLA-F-216ENST00000259951 APCP25054 2843 aa13.51□□□□□ -0.25
HLA-F-216ENST00000259951 IGHV3-72A0A0B4J1Y9 119 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 SRRM4A7MD48 611 aaKnown RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 J3QLI3 93 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 UPK2O00526 184 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 TIMM23O14925 209 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 NPFFO15130 113 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 SAA1P0DJI8 122 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 HKR1P10072 659 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 SPCS3P61009 180 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 HABP2Q14520 560 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 SSX2Q16385 188 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 LDLRAD2Q5SZI1 272 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 PUSL1Q8N0Z8 303 aaKnown RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 OR2C3Q8N628 320 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 SMIM8Q96KF7 97 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 CLCC1Q96S66 551 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 RBKSQ9H477 322 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 LYRM2Q9NU23 88 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 NUP50Q9UKX7 468 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 FOXA2Q9Y261 457 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 CSMD2Q7Z408 3487 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 CENPVL3A0A0U1RRI6 287 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 BCL2L11O43521 198 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 KBTBD11O94819 623 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 IFNA17P01571 189 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 IL6RP08887 468 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 CAV2P51636 162 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 OR2B8PP59922 312 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 ARPC5LQ9BPX5 153 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 QTRT1Q9BXR0 403 aaKnown RBP13.5□□□□□ -0.25
HLA-F-216ENST00000259951 TMEM14BQ9NUH8 114 aa13.5□□□□□ -0.25
HLA-F-216ENST00000259951 IGHV1-69DA0A0B4J2H0 117 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 MSGN1A6NI15 193 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 CEBPZOSA8MTT3 80 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 TAAR5O14804 337 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 KCNAB3O43448 404 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 IGHV1-69P01742 117 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 FGF2P09038 288 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 SAA4P35542 130 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 PDLIM3Q53GG5 364 aaPredicted RBP13.49□□□□□ -0.25
HLA-F-216ENST00000259951 TEX45Q8NA69 505 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 ZNF257Q9Y2Q1 563 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 CR1P17927 2039 aa13.49□□□□□ -0.25
HLA-F-216ENST00000259951 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 VENTXO95231 258 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 SLC51BQ86UW2 128 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 KRTAP1-3Q8IUG1 177 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 DTD1Q8TEA8 209 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 CFHR4Q92496 578 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 FOXC2Q99958 501 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 PSENENQ9NZ42 101 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 ITGB1BP2Q9UKP3 347 aa13.48□□□□□ -0.25
HLA-F-216ENST00000259951 SPDEFO95238 335 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 MOSP00540 346 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 IAPPP10997 89 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 BRS3P32247 399 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 PAX9P55771 341 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 HSPE1P61604 102 aaKnown RBP13.47□□□□□ -0.25
HLA-F-216ENST00000259951 BAXQ07812 192 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 TMEM249Q2WGJ8 235 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 TET2Q6N021 2002 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-216ENST00000259951 STX12Q86Y82 276 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 MYO9AB2RTY4 2548 aa13.47□□□□□ -0.25
HLA-F-216ENST00000259951 FAM24AA6NFZ4 105 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 TMEM50AO95807 157 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 TGFAP01135 160 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.25
HLA-F-216ENST00000259951 RPP30P78346 268 aaKnown RBP13.46□□□□□ -0.25
HLA-F-216ENST00000259951 TMEM252Q8N6L7 170 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 OR2T10Q8NGZ9 312 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 HIPK2Q9H2X6 1198 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 ENY2Q9NPA8 101 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
HLA-F-216ENST00000259951 TRAV40A0A0B4J280 105 aa13.46□□□□□ -0.26
HLA-F-216ENST00000259951 SLC25A17O43808 307 aa13.46□□□□□ -0.26
HLA-F-216ENST00000259951 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.26
HLA-F-216ENST00000259951 EIF5AP63241 154 aaKnown RBP13.46□□□□□ -0.26
HLA-F-216ENST00000259951 IFITM2Q01629 132 aa13.46□□□□□ -0.26
HLA-F-216ENST00000259951 EWSR1Q01844 656 aaKnown RBP eCLIP13.46□□□□□ -0.26
HLA-F-216ENST00000259951 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms