RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 A0A1B0GX30 115 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 F12P00748 615 aaPredicted RBP18.73■□□□□ 0.59
HOXD9-201ENST00000249499 HSPB1P04792 205 aaKnown RBP18.73■□□□□ 0.59
HOXD9-201ENST00000249499 GRNP28799 593 aaKnown RBP18.73■□□□□ 0.59
HOXD9-201ENST00000249499 PMS2P11Q13670 270 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 KHDC3LQ587J8 217 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 CLDND2Q8NHS1 167 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 H1FXQ92522 213 aaKnown RBP18.73■□□□□ 0.59
HOXD9-201ENST00000249499 SLC35D1Q9NTN3 355 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 PRNDQ9UKY0 176 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 CCL3L1P16619 93 aa18.72■□□□□ 0.59
HOXD9-201ENST00000249499 HSPE1P61604 102 aaKnown RBP18.72■□□□□ 0.59
HOXD9-201ENST00000249499 TMEM155Q4W5P6 130 aa18.72■□□□□ 0.59
HOXD9-201ENST00000249499 HEYLQ9NQ87 328 aaPredicted RBP18.72■□□□□ 0.59
HOXD9-201ENST00000249499 ZNF257Q9Y2Q1 563 aa18.72■□□□□ 0.59
HOXD9-201ENST00000249499 A0A1B0GV50 99 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 C17orf112F2Z3M2 114 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 FGF7P21781 194 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 DLX6P56179 175 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 RCC1LQ96I51 464 aaKnown RBP18.71■□□□□ 0.59
HOXD9-201ENST00000249499 MPDU1O75352 247 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 SPINK9Q5DT21 86 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 OR10G4Q8NGN3 311 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 OR13D1Q8NGV5 346 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 OSR1Q8TAX0 266 aaPredicted RBP18.71■□□□□ 0.59
HOXD9-201ENST00000249499 TMEM186Q96B77 213 aa18.71■□□□□ 0.59
HOXD9-201ENST00000249499 TRAV3A0A0B4J244 114 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 IFNA10P01566 189 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 APOA2P02652 100 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 PRB1P04280 392 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 ZNF137PP52743 207 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 RAB11AP62491 216 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 ZNF709Q8N972 641 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 RARRES2Q99969 163 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 NPCDR1Q9BY65 106 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 WDR83OSQ9Y284 106 aa18.7■□□□□ 0.58
HOXD9-201ENST00000249499 DOCK11Q5JSL3 2073 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 HOXA1P49639 335 aaPredicted RBP18.69■□□□□ 0.58
HOXD9-201ENST00000249499 ZNF726P1Q15940 193 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 SOHLH1Q5JUK2 328 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 ZNF787Q6DD87 383 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 TMEM88Q6PEY1 159 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 OR5AN1Q8NGI8 311 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 VSIRQ9H7M9 311 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 FKBP11Q9NYL4 201 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 BET1LQ9NYM9 111 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 J3QR06 171 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 CD1BP29016 333 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 ATP5IP56385 69 aaPredicted RBP18.69■□□□□ 0.58
HOXD9-201ENST00000249499 DLK1P80370 383 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 TFF3Q07654 80 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 ICAM4Q14773 271 aa18.69■□□□□ 0.58
HOXD9-201ENST00000249499 LOC102723971A0A1B0GUV8 181 aa18.68■□□□□ 0.58
HOXD9-201ENST00000249499 UPK2O00526 184 aa18.68■□□□□ 0.58
HOXD9-201ENST00000249499 SRP19P09132 144 aaKnown RBP18.68■□□□□ 0.58
HOXD9-201ENST00000249499 ETV3LQ6ZN32 361 aa18.68■□□□□ 0.58
HOXD9-201ENST00000249499 CBLN2Q8IUK8 224 aa18.68■□□□□ 0.58
HOXD9-201ENST00000249499 ENY2Q9NPA8 101 aa18.68■□□□□ 0.58
HOXD9-201ENST00000249499 ROS1P08922 2347 aa18.68■□□□□ 0.58
HOXD9-201ENST00000249499 PRSS46E5RG02 174 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 PAX6P26367 422 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 CDSNQ15517 529 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 OR9G1Q8NH87 305 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 TNFRSF14Q92956 283 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 PCGF1Q9BSM1 259 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 IGHV2-70P01814 119 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 RHEBQ15382 184 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 HAGHQ16775 308 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 TMEM177Q53S58 311 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 OR10X1Q8NGY0 326 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 SMCO4Q9NRQ5 59 aa18.67■□□□□ 0.58
HOXD9-201ENST00000249499 ARFGEF3Q5TH69 2177 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 YLPM1P49750 1951 aaKnown RBP18.66■□□□□ 0.58
HOXD9-201ENST00000249499 CTXND1A0A1B0GTU2 59 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 MAP1LC3B2A6NCE7 125 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 H0YJW9 148 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 IFNA1P01562 189 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 ELLP55199 621 aaPredicted RBP18.66■□□□□ 0.58
HOXD9-201ENST00000249499 ACSM6Q6P461 480 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 PDPNQ86YL7 162 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 RPP25LQ8N5L8 163 aaKnown RBP18.66■□□□□ 0.58
HOXD9-201ENST00000249499 MRPL20Q9BYC9 149 aaKnown RBP18.66■□□□□ 0.58
HOXD9-201ENST00000249499 MAP1LC3BQ9GZQ8 125 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 RAB1BQ9H0U4 201 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 SLC39A9Q9NUM3 307 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 OR51B2Q9Y5P1 312 aa18.66■□□□□ 0.58
HOXD9-201ENST00000249499 A0A1W2PPH5 198 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 FNDC10F2Z333 226 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 NDUFS6O75380 124 aaKnown RBP18.65■□□□□ 0.58
HOXD9-201ENST00000249499 RBP4P02753 201 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 IGKV1-16P04430 117 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 OR13C7P0DN81 318 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 IGHV1-8P0DP01 117 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 BCL2P10415 239 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 IL3RAP26951 378 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 TAGLN2P37802 199 aaKnown RBP18.65■□□□□ 0.58
HOXD9-201ENST00000249499 ERVFRD-1P60508 538 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 LCN15Q6UWW0 184 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 OR5B3Q8NH48 314 aa18.65■□□□□ 0.58
HOXD9-201ENST00000249499 ST6GALNAC6Q969X2 333 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms