RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 COX6B1P14854 86 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 REG1BP48304 166 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 VAMP2P63027 116 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 FAM71F2Q6NXP2 309 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CTNNBIP1Q9NSA3 81 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 hCG_1809904A0A1W2PP81 198 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 A0A1W2PPE2 198 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 A0A1W2PR64 198 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 A0A1W2PRV1 198 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 IGKV1-16P04430 117 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SFTA3P0C7M3 94 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 NPBWR1P48145 328 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TNFRSF9Q07011 255 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 Q8N7P7 452 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TNFRSF14Q92956 283 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RAB40CQ96S21 281 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SLC25A31Q9H0C2 315 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 HSPB7Q9UBY9 170 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CST7O76096 145 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 OR9G9P0C7N8 305 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SNCAP37840 140 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ZNF616Q08AN1 781 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TMEM88Q6PEY1 159 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 OR5C1Q8NGR4 320 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CLEC7AQ9BXN2 247 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 WSB1Q9Y6I7 421 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TSPAN15O95858 294 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ZFP36P26651 326 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CAMLGP49069 296 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 DYNLT3P51808 116 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 UBE2KP61086 200 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ARF6P62330 175 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RHOVQ96L33 236 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SLC35D1Q9NTN3 355 aa15.99■□□□□ 0.15
TNFRSF1A-201ENST00000162749 H3BP45 60 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ATP6V0CP27449 155 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RAB5CP51148 216 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ERVK-16P61578 105 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ZNF266Q14584 549 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RTL8BQ17RB0 113 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 HLA-DRB5Q30154 266 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TMEM182Q6ZP80 229 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 OR5AN1Q8NGI8 311 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TMEM140Q9NV12 185 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 PLXNB1O43157 2135 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 FAM90A9PA6NNJ1 464 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 H0YJW9 148 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RBMXL2O75526 392 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 IAPPP10997 89 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 PDLIM4P50479 330 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CLRN3Q8NCR9 226 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CLDND2Q8NHS1 167 aa15.98■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CELSR1Q9NYQ6 3014 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SNAPINO95295 136 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 LMO4P61968 165 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 DHRS7BQ6IAN0 325 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 CBLN2Q8IUK8 224 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TMEM217Q8N7C4 229 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 BEND2Q8NDZ0 799 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 NRGNQ92686 78 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 NABP2Q9BQ15 211 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SIRT7Q9NRC8 400 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 STRAPQ9Y3F4 350 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 APCP25054 2843 aa15.97■□□□□ 0.15
TNFRSF1A-201ENST00000162749 M0R1W7 72 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 PRH1P02810 166 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 COX7A1P24310 79 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 PRRX1P54821 245 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 OR2B8PP59922 312 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 BAXQ07812 192 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 AARDQ4LEZ3 155 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TGIF2LXQ8IUE1 241 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 OR13D1Q8NGV5 346 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RBKSQ9H477 322 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TRAV3A0A0B4J244 114 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ATP5J2P56134 94 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 RPL23AP62750 156 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 POU2AF1Q16633 256 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 OR4A47Q6IF82 309 aa15.96■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TXNL1O43396 289 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 HRASP01112 189 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 APOA2P02652 100 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 IL3RAP26951 378 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 RELBQ01201 579 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 COMMD1Q8N668 190 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OR4P4Q8NGL7 312 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OR2G3Q8NGZ4 309 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 QTRT1Q9BXR0 403 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PCP4L1A6NKN8 68 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SRRM4A7MD48 611 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 BUB1B-PAK6H3BSN5 160 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 H7C2Y5 167 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 H2AFB1P0C5Y9 115 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 LCN2P80188 198 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PAX2Q02962 417 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 GUK1Q16774 197 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PNKDQ8N490 385 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OR4A16Q8NH70 328 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 FAM168AQ92567 244 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms