RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Srp19Q9D7A6 144 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 C1ql3Q9ESN4 255 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vax2Q9WTP9 292 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Suclg1Q9WUM5 346 aaKnown RBP7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Trbv5A0A0B4J1G9 113 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Igkv12-38A0A0G2JEI7 115 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm3676D3Z236 184 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r173E9Q8V7 313 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr905L7N1X5 310 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 P01657 111 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 P06321 130 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Il9P15247 144 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 S100a8P27005 89 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fgf8P37237 268 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cd59bP58019 129 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Isoc2aP85094 206 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cln6Q3U466 308 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Hist2h2beQ64524 126 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Znf511Q6P0X2 227 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cd200r4Q6XJV4 270 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sys1Q78S06 156 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fam57bQ7TNV1 275 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1299Q7TQX5 312 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem106bQ80X71 275 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cd99l2Q8BIF0 237 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Zfp3Q8BLB0 497 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm10283Q8C3L5 117 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem212Q8C6V3 187 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Nup210lQ9D2F7 1881 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Wnk2Q3UH66 2149 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Dopey2Q3UHQ6 2295 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr548-ps1A0A1B0GSG0 314 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Wnt11P48615 354 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Lhx4P53776 390 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Dynlrb1P62627 96 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sumo1P63166 101 aaKnown RBP7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cdk2P97377 346 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 MidnQ3TPJ7 465 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr967Q7TRA6 310 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Synpo2lQ8BWB1 975 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r26Q8R2D7 339 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mfsd6lQ8R3N2 586 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rpp14Q9CQH8 122 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Q9DAA3 117 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem9bQ9JJR8 199 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Kcne3Q9WTW2 103 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r232A2RTT5 351 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Spink14B9EJP9 96 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm10130F6ZHM5 101 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 BatfO35284 125 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gabrg3P27681 467 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Hist1h1bP43276 223 aaKnown RBP7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Acrv1P50289 261 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 TspoP50637 169 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ccr1l1P51676 356 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Abcd3P55096 659 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 UevldQ3U1V6 471 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Znf250Q7TNU6 535 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr987Q7TRA2 309 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr923Q7TRB9 317 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Map6Q7TSJ2 906 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mogat2Q80W94 334 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cpt1cQ8BGD5 798 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Hs3st3a1Q8BKN6 393 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ubald2Q8BQH4 164 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Q8CF25 301 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem230Q8CIB6 120 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Pnpla3Q91WW7 413 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gkn3Q9D0T7 191 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Chchd2Q9D1L0 153 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sval1Q9D2X6 151 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Aig1Q9D8B1 262 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr959Q9EQ86 311 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mllt1Q9ERL0 547 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1118A0A0J9YUE7 307 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Slc25a43A2A3V2 341 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr555E9Q547 315 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm5108J3QP01 101 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm10666K7N6B8 321 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r121K7N6J4 314 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Slc6a9P28571 692 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Oprm1P42866 398 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Col9a1Q05722 921 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Defb20Q30KP3 96 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Taar5Q5QD14 337 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Thap4Q6P3Z3 569 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fbll1Q80WS3 314 aaKnown RBP7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Lcn10Q810Z1 182 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Lrtm2Q8BGX3 370 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Pom121Q8K3Z9 1200 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cd177Q8R2S8 817 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 CthQ8VCN5 398 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1102Q8VES2 324 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Golt1aQ9DCQ3 133 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 NgfrQ9Z0W1 417 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Heatr1G3X9B1 2143 aaKnown RBP7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tcf20Q9EPQ8 1987 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ighv1-42A0A0A6YY38 117 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mn1D3YWE6 1297 aa7.72□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1116E9PXB8 307 aa7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms